C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysophosphatidic acid receptor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139679 LPAR6 9606 - 13:48389567-48444704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000345941 LPAR6-001 48411139-48426907 protein_coding
  ENST00000378434 LPAR6-003 48411045-48444704 protein_coding
  ENST00000462781 LPAR6-006 48389571-48415813 processed_transcript
  ENST00000464486 LPAR6-008 48389571-48391531 processed_transcript
  ENST00000465365 LPAR6-004 48389567-48444667 processed_transcript
  ENST00000470937 LPAR6-005 48389571-48415816 processed_transcript
  ENST00000481832 LPAR6-007 48389571-48406709 processed_transcript
  ENST00000482024 LPAR6-002 48411741-48412489 processed_transcript
  ENST00000620633 LPAR6-201 48411048-48415810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000345941ENST00000378434ENST00000464486ENST00000465365ENST00000470937ENST00000482024ENST00000620633
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000345941 N/A N/A 0.750±0.03 N/A N/A N/A N/A N/A N/A N/A N/A 1.637±0.31 1.751±0.00
ENST00000378434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.156±0.00
ENST00000464486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.363±0.00
ENST00000465365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.524±0.00
ENST00000470937 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.451±0.00 N/A N/A N/A
ENST00000482024 N/A 6.495±0.00 N/A N/A N/A N/A N/A N/A N/A 1.742±0.00 12.846±0.00 13.514±0.00 5.497±0.00
ENST00000620633 9.962±0.00 8.119±0.00 1.749±0.96 11.177±1.39 3.542±0.30 3.562±0.26 5.410±0.07 4.042±1.92 13.038±2.92 0.939±0.11 5.071±2.53 7.085±2.08 1.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078H CIL_00078H_0002 CGP 13:48303751-48481986

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IDA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062552 lpar6a lysophosphatidic acid receptor 6a protein_coding Danio_rerio
ENSDARG00000069441 lpar6b lysophosphatidic acid receptor 6b protein_coding Danio_rerio
ENSMUSG00000033446 Lpar6 lysophosphatidic acid receptor 6 protein_coding Mus_musculus

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