C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: strawberry notch homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139697 SBNO1 9606 - 12:123289109-123364843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267176 SBNO1-001 123289109-123364843 protein_coding
  ENST00000420886 SBNO1-201 123289109-123350441 protein_coding
  ENST00000602398 SBNO1-002 123295905-123364828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267176ENST00000420886ENST00000602398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267176 2.159±0.00 3.610±0.00 N/A 2.331±0.61 1.029±0.00 2.815±0.00 0.909±0.12 3.965±0.00 2.405±0.49 1.006±0.00 3.284±0.00 3.400±1.02 1.355±0.52 13.629±0.20
ENST00000420886 N/A N/A N/A 1.256±0.23 1.666±0.00 N/A N/A 1.464±0.00 N/A 2.009±0.00 N/A 1.581±0.00 0.636±0.00 N/A
ENST00000602398 2.100±0.00 N/A 3.629±0.00 4.370±1.76 6.816±0.00 7.870±0.00 2.733±0.17 4.431±0.00 6.282±0.00 6.386±0.00 2.729±1.14 6.281±3.58 3.028±2.51 36.077±20.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0003J6 CIL_0003J6_0001 CGP 12:123260971-123364843
CIL_000665 CIL_000665_0001 CGP 12:123289109-123409358

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0016491 IEA oxidoreductase activity
GO:0016787 IEA hydrolase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087600 strawberry notch homolog 1 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000038095 Sbno1 sno, strawberry notch homolog 1 (Drosophila) protein_coding Mus_musculus

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