C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 26
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139746 RBM26 9606 - 13:79311824-79406477 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267229 RBM26-002 79319954-79405788 protein_coding
  ENST00000438724 RBM26-201 79318868-79406221 protein_coding
  ENST00000438737 RBM26-004 79319954-79406215 protein_coding
  ENST00000449987 RBM26-006 79311824-79341212 protein_coding
  ENST00000461008 RBM26-003 79365760-79366710 processed_transcript
  ENST00000472143 RBM26-005 79376217-79406477 retained_intron
  ENST00000622611 RBM26-202 79318868-79406221 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267229ENST00000438724ENST00000438737ENST00000449987ENST00000622611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267229 2.219±0.00 N/A 2.572±0.00 4.245±0.00 4.076±0.00 3.572±0.88 1.223±0.00 1.610±0.69 3.196±0.00 5.392±0.00 0.800±0.00 3.861±0.81 2.451±1.63 7.711±3.41
ENST00000438724 1.528±0.00 4.959±0.00 N/A 1.341±0.00 3.350±1.42 N/A 1.655±0.00 1.918±1.07 1.181±0.00 2.806±0.29 N/A 2.897±0.13 1.164±0.47 2.477±0.21
ENST00000438737 2.321±0.00 N/A N/A 4.002±0.00 N/A 4.266±0.00 1.005±0.37 N/A 2.113±0.00 N/A 1.717±0.00 4.654±0.00 0.569±0.00 N/A
ENST00000449987 1.750±0.00 7.020±0.00 N/A 3.210±0.00 3.819±1.06 N/A N/A 3.322±0.00 1.272±0.00 2.585±0.52 1.638±0.00 3.699±0.41 0.657±0.00 7.943±0.00
ENST00000622611 N/A N/A N/A 1.870±0.00 1.140±0.00 N/A N/A 1.273±0.00 0.360±0.00 1.134±0.00 0.970±0.00 1.412±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EJ CIL_0002EJ_0001 CGP 13:78614291-79406477
CIL_0002EH CIL_0002EH_0001 CGP 13:79311824-79556075

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0006397 IEA mRNA processing
GO:0010923 IDA negative regulation of phosphatase activity
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018889 RBM26 RNA binding motif protein 26 protein_coding Danio_rerio
ENSMUSG00000022119 Rbm26 RNA binding motif protein 26 protein_coding Mus_musculus

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