C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: growth hormone regulated TBC protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139835 GRTP1 9606 - 13:113324164-113364148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326039 GRTP1-001 113325062-113355436 protein_coding
  ENST00000375430 GRTP1-201 113324845-113364148 protein_coding
  ENST00000375431 GRTP1-002 113324190-113364126 protein_coding
  ENST00000476439 GRTP1-003 113359617-113364131 processed_transcript
  ENST00000620217 GRTP1-202 113324164-113364148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326039ENST00000375430ENST00000375431ENST00000476439ENST00000620217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326039 N/A N/A 2.111±0.00 N/A 0.528±0.00 0.485±0.00 N/A 1.730±0.00 N/A 0.176±0.00 0.591±0.00 6.271±4.18 1.073±0.00 1.562±0.00
ENST00000375430 N/A 1.036±0.00 N/A 0.162±0.09 1.208±0.00 0.973±0.00 0.165±0.07 N/A N/A N/A 0.588±0.00 N/A 0.527±0.00 N/A
ENST00000375431 0.639±0.00 0.729±0.00 N/A 0.663±0.00 0.767±0.23 1.000±0.00 N/A 4.010±0.30 10.946±0.00 0.887±0.00 1.048±0.52 7.726±4.69 1.525±0.40 2.463±0.24
ENST00000476439 N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A 1.255±0.00
ENST00000620217 N/A 0.409±0.00 N/A 0.041±0.00 N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058I CIL_00058I_0002 CGP 13:113297241-113364148
CIL_00058E CIL_00058E_0002 CGP 13:113324164-113453524

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029936 grtp1a growth hormone regulated TBC protein 1a protein_coding Danio_rerio
ENSDARG00000030269 grtp1b growth hormone regulated TBC protein 1b protein_coding Danio_rerio
ENSMUSG00000038515 Grtp1 GH regulated TBC protein 1 protein_coding Mus_musculus

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