C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MAM domain containing glycosylphosphatidylinositol anchor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139915 MDGA2 9606 - 14:46839629-47674954 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357362 MDGA2-002 46841785-47343118 protein_coding
  ENST00000399232 MDGA2-001 46840092-47674954 protein_coding
  ENST00000426342 MDGA2-201 46839629-47301560 protein_coding
  ENST00000472499 MDGA2-004 47299347-47343116 processed_transcript
  ENST00000482848 MDGA2-006 47058600-47343192 nonsense_mediated_decay
  ENST00000486952 MDGA2-005 47218055-47343234 protein_coding
  ENST00000554762 MDGA2-007 47035189-47131838 protein_coding
  ENST00000555521 MDGA2-010 46873919-46920174 retained_intron
  ENST00000557238 MDGA2-008 46870938-47626525 nonsense_mediated_decay
  ENST00000557516 MDGA2-009 46873334-46882222 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000357362ENST00000399232ENST00000426342ENST00000482848ENST00000486952ENST00000554762ENST00000557238ENST00000557516
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000357362 N/A 1.360±0.97 0.013±0.00 0.011±0.00 N/A N/A N/A N/A N/A 0.643±0.37
ENST00000399232 N/A 0.791±0.00 N/A 0.034±0.02 0.018±0.00 0.018±0.00 0.047±0.00 0.016±0.00 N/A 0.346±0.06
ENST00000426342 N/A 2.065±0.00 N/A N/A N/A N/A N/A 0.007±0.00 0.006±0.00 0.087±0.00
ENST00000482848 N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A
ENST00000486952 N/A N/A N/A 0.735±0.00 N/A N/A N/A N/A N/A N/A
ENST00000554762 N/A N/A N/A N/A N/A N/A 0.296±0.00 0.018±0.00 N/A N/A
ENST00000557238 0.003±0.00 0.696±0.00 N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A
ENST00000557516 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046T CIL_00046T_0001 CGP 14:46651010-47674954
CIL_0005Q4 CIL_0005Q4_0001 CGP 14:46839629-49599164

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007389 IEA pattern specification process
GO:0016020 IEA membrane
GO:0021522 ISS spinal cord motor neuron differentiation
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024017 mamdc1 MAM domain containing 1 protein_coding Danio_rerio
ENSDARG00000086799 MDGA2 (2 of 4) MAM domain containing glycosylphosphatidylinositol anchor 2 protein_coding Danio_rerio
ENSMUSG00000034912 Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 protein_coding Mus_musculus

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