C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139990 DCAF5 9606 - 14:69050881-69153150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341516 DCAF5-001 69050881-69153126 protein_coding
  ENST00000389997 DCAF5-003 69089204-69152983 protein_coding
  ENST00000553293 DCAF5-009 69055210-69118194 processed_transcript
  ENST00000553943 DCAF5-006 69119098-69153150 retained_intron
  ENST00000554215 DCAF5-005 69051855-69152599 protein_coding
  ENST00000554681 DCAF5-007 69091674-69153040 protein_coding
  ENST00000556111 DCAF5-008 69062428-69152999 nonsense_mediated_decay
  ENST00000556847 DCAF5-004 69053802-69152609 protein_coding
  ENST00000557386 DCAF5-002 69053825-69153003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341516ENST00000389997ENST00000554215ENST00000556847ENST00000557386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341516 1.511±0.00 1.759±0.00 N/A 1.746±0.35 1.000±0.00 2.047±0.00 3.638±3.31 1.140±0.00 0.992±0.00 1.154±0.20 10.711±9.23 2.089±1.15 1.073±0.17 5.730±1.28
ENST00000389997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.353±0.00 N/A N/A
ENST00000554215 6.848±0.00 10.074±0.00 1.702±0.00 2.335±0.00 3.850±1.95 5.331±2.72 2.688±0.00 5.727±3.14 3.480±0.00 7.474±0.00 2.685±0.00 5.659±3.10 4.813±0.00 9.104±0.65
ENST00000556847 N/A N/A 3.742±0.00 N/A N/A N/A N/A N/A 1.692±0.00 N/A N/A N/A N/A 10.158±0.00
ENST00000557386 5.284±0.00 N/A N/A 1.240±0.00 2.997±1.44 3.635±1.08 3.121±2.27 1.576±0.00 2.079±0.24 4.853±3.77 1.776±0.00 2.412±0.62 3.679±0.85 21.809±5.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JZ CIL_0001JZ_0002 CGP 14:68874143-69153150
CIL_0002CH CIL_0002CH_0001 CGP 14:69050881-69244020

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IEA mitochondrion
GO:0016567 IEA protein ubiquitination
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060320 dcaf5 ddb1 and cul4 associated factor 5 protein_coding Danio_rerio
ENSMUSG00000049106 Dcaf5 DDB1 and CUL4 associated factor 5 protein_coding Mus_musculus

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