C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transducin-like enhancer of split 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140332 TLE3 9606 - 15:70047790-70098176 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317509 TLE3-004 70048275-70097900 protein_coding
  ENST00000440567 TLE3-010 70049802-70096752 protein_coding
  ENST00000451782 TLE3-030 70050097-70096844 protein_coding
  ENST00000537387 TLE3-024 70066144-70074595 nonsense_mediated_decay
  ENST00000539550 TLE3-022 70049802-70094785 protein_coding
  ENST00000542329 TLE3-028 70053174-70055263 retained_intron
  ENST00000557815 TLE3-023 70048977-70058790 retained_intron
  ENST00000557907 TLE3-015 70050097-70096798 protein_coding
  ENST00000557919 TLE3-017 70048869-70097571 nonsense_mediated_decay
  ENST00000557984 TLE3-026 70066123-70095588 protein_coding
  ENST00000557997 TLE3-016 70049799-70097888 protein_coding
  ENST00000558201 TLE3-011 70049802-70096437 protein_coding
  ENST00000558379 TLE3-008 70050097-70096798 protein_coding
  ENST00000558939 TLE3-001 70047790-70098176 protein_coding
  ENST00000559048 TLE3-007 70049799-70096604 protein_coding
  ENST00000559191 TLE3-009 70049836-70097866 protein_coding
  ENST00000559574 TLE3-025 70097405-70097848 processed_transcript
  ENST00000559608 TLE3-029 70049801-70051505 retained_intron
  ENST00000559826 TLE3-005 70058091-70058815 retained_intron
  ENST00000559929 TLE3-013 70049091-70096851 protein_coding
  ENST00000560525 TLE3-019 70048976-70097019 nonsense_mediated_decay
  ENST00000560589 TLE3-012 70049091-70095950 protein_coding
  ENST00000560939 TLE3-020 70049799-70096701 protein_coding
  ENST00000560996 TLE3-014 70066143-70096302 protein_coding
  ENST00000561453 TLE3-002 70049799-70097917 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317509ENST00000440567ENST00000451782ENST00000557815ENST00000557907ENST00000557997ENST00000558379ENST00000558939ENST00000559191ENST00000559608ENST00000559929ENST00000560525ENST00000560996
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317509 8.861±0.00 6.372±0.00 0.635±0.00 1.679±0.00 4.916±0.00 N/A 0.220±0.00 3.142±0.00 0.344±0.00 5.541±0.00 N/A 3.176±0.00 N/A 4.815±0.00
ENST00000440567 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.219±0.00 N/A 2.321±0.00 N/A N/A
ENST00000451782 N/A N/A 2.884±0.00 N/A 2.455±0.00 N/A N/A N/A 2.908±0.00 N/A N/A N/A 5.542±0.00 N/A
ENST00000557815 N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A
ENST00000557907 N/A N/A N/A N/A N/A 2.250±0.00 0.291±0.00 0.628±0.00 0.695±0.00 N/A 0.379±0.00 N/A N/A 4.896±0.00
ENST00000557997 6.930±0.00 8.075±0.00 N/A N/A 7.659±0.00 8.136±0.00 0.495±0.38 0.836±0.00 0.498±0.00 14.549±0.00 2.040±0.00 8.664±0.00 8.026±1.41 6.931±0.00
ENST00000558379 N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000558939 N/A N/A N/A N/A 1.511±0.00 1.403±0.00 N/A N/A N/A N/A N/A 1.484±0.00 N/A 3.436±0.00
ENST00000559191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.734±0.00 N/A N/A N/A
ENST00000559608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.385±0.00
ENST00000559929 N/A N/A N/A 3.918±0.00 3.753±0.00 N/A 0.232±0.00 N/A N/A N/A 1.683±0.00 N/A N/A N/A
ENST00000560525 N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A N/A N/A N/A 7.181±2.90 14.212±0.00 6.210±0.00
ENST00000560996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.785±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BU CIL_0009BU_0001 VISTA 15:69554908-70157197
CIL_0008V4 CIL_0008V4_0001 VISTA 15:69799237-70400274
CIL_0004GW CIL_0004GW_0002 CGP 15:70047790-70763593

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 TAS signal transduction
GO:0007219 TAS Notch signaling pathway
GO:0009887 TAS organ morphogenesis
GO:0016055 IEA Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002787 gro2 groucho 2 protein_coding Danio_rerio
ENSDARG00000069006 gro1 groucho 1 protein_coding Danio_rerio
ENSMUSG00000032280 Tle3 transducin-like enhancer of split 3, homolog of Drosophila E(spl) protein_coding Mus_musculus

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