C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140365 COMMD4 9606 + 15:75335891-75343224 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267935 COMMD4-001 75335891-75340273 protein_coding
  ENST00000338995 COMMD4-005 75336059-75340273 protein_coding
  ENST00000480484 COMMD4-002 75336076-75343224 nonsense_mediated_decay
  ENST00000561662 COMMD4-017 75336086-75338374 processed_transcript
  ENST00000562310 COMMD4-025 75338481-75339863 retained_intron
  ENST00000562610 COMMD4-012 75336054-75340271 nonsense_mediated_decay
  ENST00000562789 COMMD4-020 75336099-75340271 protein_coding
  ENST00000563220 COMMD4-009 75338062-75340269 retained_intron
  ENST00000564068 COMMD4-007 75336063-75340266 retained_intron
  ENST00000564587 COMMD4-014 75336063-75338840 retained_intron
  ENST00000564815 COMMD4-011 75336053-75340073 protein_coding
  ENST00000565517 COMMD4-016 75336063-75339307 retained_intron
  ENST00000565834 COMMD4-008 75338061-75340116 retained_intron
  ENST00000566230 COMMD4-015 75336063-75338746 retained_intron
  ENST00000566843 COMMD4-004 75336021-75340273 retained_intron
  ENST00000567023 COMMD4-006 75336060-75339400 retained_intron
  ENST00000567195 COMMD4-010 75336020-75340270 protein_coding
  ENST00000567377 COMMD4-019 75336087-75339777 protein_coding
  ENST00000567399 COMMD4-022 75336084-75339552 retained_intron
  ENST00000567720 COMMD4-013 75336061-75339764 nonsense_mediated_decay
  ENST00000567935 COMMD4-026 75338554-75341198 retained_intron
  ENST00000568034 COMMD4-018 75336086-75339010 retained_intron
  ENST00000568301 COMMD4-021 75336105-75339871 protein_coding
  ENST00000568877 COMMD4-023 75338061-75339575 retained_intron
  ENST00000569245 COMMD4-024 75338264-75340256 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267935ENST00000338995ENST00000480484ENST00000562310ENST00000562610ENST00000562789ENST00000564068ENST00000564587ENST00000564815ENST00000566230ENST00000566843ENST00000567023ENST00000567195ENST00000569245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267935 N/A N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A 11.086±0.00 5.057±0.00 25.906±0.00
ENST00000338995 7.661±0.00 5.929±0.00 0.905±0.00 N/A 4.961±2.86 2.430±0.00 2.932±0.00 N/A N/A 7.733±0.00 N/A 9.385±4.63 17.777±1.47 10.672±0.00
ENST00000480484 N/A 1.273±0.00 0.169±0.00 0.870±0.00 0.366±0.23 N/A 0.232±0.13 0.110±0.00 0.201±0.00 N/A 0.146±0.00 0.569±0.00 N/A N/A
ENST00000562310 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.042±0.00 N/A N/A N/A N/A
ENST00000562610 5.480±0.00 5.799±0.00 N/A 1.749±0.00 4.103±0.00 0.627±0.00 N/A 6.374±2.70 3.673±3.22 7.817±0.00 1.910±0.83 6.545±1.21 16.738±0.47 7.463±0.00
ENST00000562789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.267±0.00 N/A N/A N/A
ENST00000564068 N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A
ENST00000564587 N/A N/A 0.808±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.437±0.00 N/A N/A
ENST00000564815 11.457±0.00 15.515±0.00 N/A 5.647±4.17 14.301±0.00 10.807±0.00 2.625±0.00 17.762±0.00 5.283±0.00 0.550±0.00 N/A 5.969±0.00 8.932±0.00 22.035±0.00
ENST00000566230 N/A N/A N/A N/A 1.295±0.00 N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A
ENST00000566843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.194±0.00 N/A N/A
ENST00000567023 N/A N/A 0.564±0.00 N/A N/A 0.673±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567195 N/A 6.794±0.00 0.507±0.00 6.280±3.76 N/A 8.802±0.00 6.077±0.00 13.191±0.00 9.332±0.00 0.918±0.00 3.100±0.00 7.230±0.00 17.878±0.00 20.312±11.91
ENST00000569245 N/A N/A N/A N/A N/A N/A 3.816±0.00 N/A 4.900±0.00 10.097±0.00 N/A 16.704±0.00 22.286±3.94 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061946 commd4 COMM domain containing 4 protein_coding Danio_rerio
ENSMUSG00000032299 Commd4 COMM domain containing 4 protein_coding Mus_musculus

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