C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily A, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140403 DNAJA4 9606 + 15:78264086-78282196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343789 DNAJA4-003 78264562-78282196 protein_coding
  ENST00000394852 DNAJA4-002 78264574-78282192 protein_coding
  ENST00000394855 DNAJA4-001 78264086-78282196 protein_coding
  ENST00000423642 DNAJA4-004 78264562-78274266 nonsense_mediated_decay
  ENST00000440911 DNAJA4-012 78264544-78280541 nonsense_mediated_decay
  ENST00000446172 DNAJA4-006 78266181-78280684 protein_coding
  ENST00000480425 DNAJA4-010 78279137-78282196 retained_intron
  ENST00000483802 DNAJA4-011 78264562-78280668 nonsense_mediated_decay
  ENST00000485075 DNAJA4-008 78270017-78275436 retained_intron
  ENST00000489435 DNAJA4-005 78264145-78266039 protein_coding
  ENST00000493321 DNAJA4-009 78274997-78280545 retained_intron
  ENST00000542636 DNAJA4-007 78264609-78280059 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000343789ENST00000394852ENST00000394855ENST00000440911ENST00000446172ENST00000480425ENST00000483802ENST00000485075ENST00000493321
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000343789 N/A N/A N/A 4.731±0.00 1.751±0.00 N/A 1.216±0.00 N/A N/A 3.035±1.48 2.103±0.43 N/A
ENST00000394852 N/A N/A N/A 2.030±0.00 N/A N/A 1.425±0.00 N/A N/A 8.481±0.00 1.146±0.00 N/A
ENST00000394855 N/A N/A N/A N/A N/A 3.759±0.00 N/A N/A 1.861±0.00 4.496±0.00 0.504±0.00 N/A
ENST00000440911 3.144±0.00 3.552±0.00 N/A 22.175±0.00 N/A N/A N/A N/A 0.168±0.00 8.780±0.00 N/A 41.990±7.41
ENST00000446172 N/A N/A 0.845±0.00 N/A N/A N/A 1.599±0.00 N/A 2.811±0.00 2.345±0.00 N/A 30.143±0.00
ENST00000480425 N/A N/A 0.815±0.00 N/A 1.270±0.00 N/A N/A N/A N/A 2.150±0.00 N/A N/A
ENST00000483802 N/A N/A N/A N/A N/A 3.150±0.00 N/A N/A N/A 7.716±0.00 1.576±0.00 48.540±0.00
ENST00000485075 N/A N/A 0.430±0.00 2.133±0.00 2.514±0.00 N/A N/A 0.438±0.00 1.520±1.44 1.624±0.00 1.335±0.63 N/A
ENST00000493321 N/A N/A N/A N/A N/A N/A N/A 0.420±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TL CIL_0003TL_0001 CGP 15:78167468-78282196
CIL_0003TI CIL_0003TI_0001 CGP 15:78264086-78299794

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 IDA cytosol
GO:0006457 IEA protein folding
GO:0009408 IEA response to heat
GO:0016020 IDA membrane
GO:0031072 IEA heat shock protein binding
GO:0042026 IDA protein refolding
GO:0046872 IEA metal ion binding
GO:0051082 IEA:IDA unfolded protein binding
GO:0051087 IPI chaperone binding
GO:0090084 IDA negative regulation of inclusion body assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051762 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 protein_coding Danio_rerio
ENSMUSG00000032285 Dnaja4 DnaJ (Hsp40) homolog, subfamily A, member 4 protein_coding Mus_musculus

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