C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: de-etiolated homolog 1 (Arabidopsis)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140543 DET1 9606 - 15:88511559-88546675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268148 DET1-001 88512483-88546675 protein_coding
  ENST00000444300 DET1-201 88512483-88536334 protein_coding
  ENST00000557837 DET1-003 88512483-88546660 nonsense_mediated_decay
  ENST00000557842 DET1-002 88511559-88546645 nonsense_mediated_decay
  ENST00000558413 DET1-004 88530773-88546634 protein_coding
  ENST00000559656 DET1-006 88531868-88546337 processed_transcript
  ENST00000564406 DET1-007 88512483-88546653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268148ENST00000444300ENST00000557842ENST00000559656ENST00000564406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268148 2.437±0.00 1.864±0.00 0.634±0.00 1.975±0.00 3.500±0.00 1.564±0.79 0.464±0.00 2.607±0.00 0.841±0.00 N/A N/A 8.556±0.00 N/A 3.982±0.00
ENST00000444300 N/A N/A N/A N/A 1.060±0.00 1.043±0.00 N/A 1.586±0.00 1.304±0.00 1.632±0.00 2.713±0.00 4.325±0.00 2.669±0.25 N/A
ENST00000557842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.048±0.00 N/A N/A
ENST00000559656 N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000564406 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.659±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011H CIL_00011H_0001 CGP 15:88467453-88546675
CIL_00011E CIL_00011E_0001 CGP 15:88511559-88632282

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006145 det1 de-etiolated homolog 1 (Arabidopsis) protein_coding Danio_rerio
ENSMUSG00000030610 Det1 de-etiolated homolog 1 (Arabidopsis) protein_coding Mus_musculus

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