C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glyoxylate reductase 1 homolog (Arabidopsis)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140632 GLYR1 9606 - 16:4803203-4847342 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321919 GLYR1-001 4803203-4847342 protein_coding
  ENST00000436648 GLYR1-002 4803203-4847279 protein_coding
  ENST00000586095 GLYR1-013 4817664-4821664 retained_intron
  ENST00000586901 GLYR1-010 4822900-4833200 processed_transcript
  ENST00000587297 GLYR1-009 4821204-4832221 protein_coding
  ENST00000587875 GLYR1-011 4832455-4847282 retained_intron
  ENST00000587936 GLYR1-006 4803254-4814629 nonsense_mediated_decay
  ENST00000588297 GLYR1-004 4817653-4847288 protein_coding
  ENST00000588732 GLYR1-003 4803203-4847271 nonsense_mediated_decay
  ENST00000589389 GLYR1-005 4803203-4846210 protein_coding
  ENST00000591159 GLYR1-012 4832865-4843912 retained_intron
  ENST00000591451 GLYR1-007 4805049-4847265 protein_coding
  ENST00000591846 GLYR1-008 4814567-4817923 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321919ENST00000436648ENST00000589389ENST00000591451
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321919 12.905±0.00 10.205±0.00 5.181±0.00 4.345±1.19 3.607±1.16 7.257±0.00 9.919±8.54 6.117±4.46 3.187±0.00 7.796±3.09 8.007±0.00 12.318±9.68 6.749±0.91 N/A
ENST00000436648 N/A N/A N/A N/A 5.700±0.00 3.487±0.91 N/A 9.148±0.00 8.457±0.00 N/A 3.091±1.21 12.138±4.01 7.365±1.71 9.023±0.00
ENST00000589389 5.597±0.00 N/A N/A 7.119±0.00 6.609±0.00 4.921±0.00 N/A 5.236±0.00 5.795±0.00 N/A N/A N/A 6.379±1.11 13.841±0.00
ENST00000591451 N/A N/A N/A 4.410±0.00 4.146±0.00 N/A N/A 2.931±0.00 3.979±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G7 CIL_0001G7_0001 CGP 16:4796968-4847342
CIL_00004T CIL_00004T_0001 CGP 16:4803203-4882360

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004616 IEA phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006098 IEA pentose-phosphate shunt
GO:0035064 IDA methylated histone binding
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037897 glyr1 glyoxylate reductase 1 homolog (Arabidopsis) protein_coding Danio_rerio
ENSMUSG00000022536 Glyr1 glyoxylate reductase 1 homolog (Arabidopsis) protein_coding Mus_musculus

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