C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphomannomutase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140650 PMM2 9606 + 16:8788823-8849331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268261 PMM2-001 8797817-8849331 protein_coding
  ENST00000562025 PMM2-017 8842207-8848119 processed_transcript
  ENST00000562318 PMM2-003 8797842-8848051 nonsense_mediated_decay
  ENST00000562448 PMM2-013 8797842-8806679 retained_intron
  ENST00000564030 PMM2-008 8797821-8807034 retained_intron
  ENST00000564069 PMM2-014 8797912-8813067 nonsense_mediated_decay
  ENST00000565221 PMM2-006 8797867-8848030 nonsense_mediated_decay
  ENST00000565837 PMM2-019 8788840-8795662 processed_transcript
  ENST00000565896 PMM2-012 8797842-8811667 nonsense_mediated_decay
  ENST00000566196 PMM2-010 8797839-8802389 retained_intron
  ENST00000566540 PMM2-004 8797842-8848777 nonsense_mediated_decay
  ENST00000566604 PMM2-002 8797837-8848124 nonsense_mediated_decay
  ENST00000566983 PMM2-018 8788823-8847868 protein_coding
  ENST00000567697 PMM2-007 8807564-8849325 retained_intron
  ENST00000568602 PMM2-011 8797842-8811111 nonsense_mediated_decay
  ENST00000569958 PMM2-015 8797867-8848039 protein_coding
  ENST00000570076 PMM2-005 8797850-8848322 nonsense_mediated_decay
  ENST00000570134 PMM2-016 8797838-8829258 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartMuscleOvaryPlacentaENST00000268261ENST00000562318ENST00000564069ENST00000567697
Transcript ID Adipose Adrenal Breast Colon Heart Muscle Ovary Placenta
ENST00000268261 12.876±0.00 32.668±0.00 20.003±0.00 N/A 5.938±0.00 1.923±1.72 11.265±3.54 25.603±11.49
ENST00000562318 N/A N/A N/A 8.016±0.00 N/A N/A N/A N/A
ENST00000564069 N/A N/A N/A N/A N/A N/A N/A 29.589±0.00
ENST00000567697 N/A N/A 4.901±0.00 2.420±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EU CIL_0000EU_0001 CGP 16:8674565-8797648
CIL_0000ET CIL_0000ET_0001 CGP 16:8780384-8849331
CIL_0000EW CIL_0000EW_0001 CGP 16:8788823-8869012

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004615 IEA phosphomannomutase activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006486 TAS protein glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0008152 IEA metabolic process
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019307 IEA mannose biosynthetic process
GO:0043025 IEA neuronal cell body
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037654 pmm2 phosphomannomutase 2 protein_coding Danio_rerio
ENSMUSG00000022711 Pmm2 phosphomannomutase 2 protein_coding Mus_musculus

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