C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebellar degeneration-related protein 2, 62kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140743 CDR2 9606 - 16:22345936-22437165 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268383 CDR2-001 22345936-22374617 protein_coding
  ENST00000561630 CDR2-003 22347634-22374437 nonsense_mediated_decay
  ENST00000563573 CDR2-005 22349372-22433665 protein_coding
  ENST00000564542 CDR2-007 22347475-22431596 protein_coding
  ENST00000567010 CDR2-004 22349156-22349773 protein_coding
  ENST00000567406 CDR2-002 22347755-22375090 protein_coding
  ENST00000569045 CDR2-006 22364928-22437165 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268383ENST00000564542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268383 9.243±0.00 12.359±0.00 4.508±0.00 5.489±3.41 7.359±2.21 8.783±4.66 1.439±0.54 6.411±4.21 4.929±1.37 17.998±14.00 1.742±1.10 13.208±6.56 7.319±1.81 40.137±22.28
ENST00000564542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GX CIL_0006GX_0001 CGP 16:22297375-22437165

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035952 cdr2a cerebellar degeneration-related protein 2a protein_coding Danio_rerio
ENSDARG00000037359 CDR2 (2 of 2) cerebellar degeneration-related protein 2, 62kDa protein_coding Danio_rerio
ENSMUSG00000030878 Cdr2 cerebellar degeneration-related 2 protein_coding Mus_musculus

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