C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140835 CHST4 9606 + 16:71525233-71538746 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338482 CHST4-001 71525233-71538746 protein_coding
  ENST00000539698 CHST4-002 71526251-71538597 protein_coding
  ENST00000572693 CHST4-003 71536586-71537918 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryTestisENST00000338482ENST00000539698ENST00000572693
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000338482 N/A N/A N/A 0.011±0.00 0.138±0.00 N/A 0.032±0.00 0.029±0.00 0.126±0.00 0.041±0.00 N/A
ENST00000539698 0.043±0.00 0.015±0.00 0.107±0.00 N/A 0.007±0.00 N/A N/A 0.680±0.65 0.126±0.00 0.149±0.12 0.121±0.08
ENST00000572693 0.033±0.00 0.049±0.00 0.441±0.00 0.040±0.00 N/A 0.113±0.00 0.049±0.00 N/A 0.159±0.00 0.048±0.01 0.043±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0001517 IDA N-acetylglucosamine 6-O-sulfotransferase activity
GO:0005802 IDA trans-Golgi network
GO:0005975 IEA carbohydrate metabolic process
GO:0006044 IDA N-acetylglucosamine metabolic process
GO:0006477 IEA protein sulfation
GO:0006790 IDA sulfur compound metabolic process
GO:0006928 TAS cellular component movement
GO:0006954 IEA inflammatory response
GO:0006955 TAS immune response
GO:0007155 TAS cell adhesion
GO:0007267 TAS cell-cell signaling
GO:0008146 TAS:IEA sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0031228 NAS intrinsic component of Golgi membrane
GO:0050901 IEA leukocyte tethering or rolling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061357 CHST5 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 protein_coding Danio_rerio
ENSMUSG00000035930 Chst4 carbohydrate (chondroitin 6/keratan) sulfotransferase 4 protein_coding Mus_musculus

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