C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC/LysM-associated domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140950 TLDC1 9606 - 16:84476421-84554033 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343629 TLDC1-001 84476421-84504758 protein_coding
  ENST00000561807 TLDC1-006 84489352-84504656 processed_transcript
  ENST00000562447 TLDC1-009 84495818-84504621 protein_coding
  ENST00000565079 TLDC1-007 84489363-84554033 protein_coding
  ENST00000565701 TLDC1-010 84497704-84504629 retained_intron
  ENST00000565765 TLDC1-008 84497951-84504659 protein_coding
  ENST00000566995 TLDC1-003 84479697-84504647 nonsense_mediated_decay
  ENST00000567321 TLDC1-004 84486004-84488436 retained_intron
  ENST00000570036 TLDC1-002 84479791-84504690 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000343629ENST00000561807ENST00000566995ENST00000567321ENST00000570036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000343629 N/A 0.950±0.00 N/A 0.615±0.31 0.643±0.00 0.523±0.00 0.198±0.00 0.118±0.00 N/A N/A 1.860±0.39 3.569±1.41 1.182±0.00
ENST00000561807 N/A N/A 0.970±0.00 2.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566995 0.684±0.00 N/A N/A 0.648±0.00 N/A N/A 0.334±0.19 N/A 0.806±0.00 0.721±0.00 1.282±0.00 3.508±0.00 1.188±0.11
ENST00000567321 N/A N/A N/A 0.315±0.00 N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000570036 0.516±0.00 1.153±0.00 N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A 1.471±0.00 N/A 1.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000006 CIL_000006_0001 CGP 16:84368527-84554033
CIL_0002K5 CIL_0002K5_0001 CGP 16:84476421-84618077

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062951 tldc1 TBC/LysM-associated domain containing 1 protein_coding Danio_rerio
ENSMUSG00000034105 Tldc1 TBC/LysM associated domain containing 1 protein_coding Mus_musculus

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