C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: additional sex combs like transcriptional regulator 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141431 ASXL3 9606 + 18:33578615-33751192 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269197 ASXL3-002 33578632-33751192 protein_coding
  ENST00000585426 ASXL3-010 33605594-33649617 nonsense_mediated_decay
  ENST00000586327 ASXL3-008 33605586-33661737 protein_coding
  ENST00000586596 ASXL3-015 33578666-33670749 protein_coding
  ENST00000586948 ASXL3-007 33578882-33627043 processed_transcript
  ENST00000588038 ASXL3-009 33605587-33627002 nonsense_mediated_decay
  ENST00000588741 ASXL3-011 33605599-33646353 nonsense_mediated_decay
  ENST00000590189 ASXL3-004 33578641-33670742 protein_coding
  ENST00000590225 ASXL3-012 33605608-33646349 nonsense_mediated_decay
  ENST00000590973 ASXL3-014 33607607-33661666 nonsense_mediated_decay
  ENST00000592288 ASXL3-001 33578615-33743561 nonsense_mediated_decay
  ENST00000592349 ASXL3-006 33578771-33626928 processed_transcript
  ENST00000592541 ASXL3-005 33578644-33670761 nonsense_mediated_decay
  ENST00000593195 ASXL3-003 33578632-33661645 nonsense_mediated_decay
  ENST00000593235 ASXL3-013 33605626-33670718 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269197ENST00000586596ENST00000590973ENST00000592288ENST00000592541
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269197 0.063±0.00 0.075±0.00 0.249±0.00 0.312±0.00 0.051±0.00 0.236±0.00 0.029±0.00 0.388±0.00 0.067±0.00 0.028±0.00 0.042±0.00 0.503±0.40 0.011±0.00 N/A
ENST00000586596 N/A N/A N/A N/A N/A N/A N/A 1.378±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590973 N/A N/A 3.028±0.00 N/A N/A N/A N/A 0.522±0.00 N/A N/A N/A 3.110±0.00 N/A N/A
ENST00000592288 0.140±0.00 0.070±0.00 0.639±0.00 0.277±0.00 N/A N/A 0.079±0.00 0.032±0.00 0.248±0.16 0.093±0.07 N/A N/A 0.111±0.00 2.476±1.55
ENST00000592541 N/A N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PA CIL_0004PA_0001 CGP 18:32937402-33751192
CIL_0006PC CIL_0006PC_0001 CGP 18:33578615-34224952

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000045215 Asxl3 additional sex combs like 3 (Drosophila) protein_coding Mus_musculus

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