C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5'-nucleotidase, cytosolic IIIB
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141698 NT5C3B 9606 - 17:41825181-41836263 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000393910 NT5C3B-015 41825238-41836197 retained_intron
  ENST00000415460 NT5C3B-009 41825654-41836241 protein_coding
  ENST00000435506 NT5C3B-008 41825521-41836263 protein_coding
  ENST00000445655 NT5C3B-011 41827426-41836244 nonsense_mediated_decay
  ENST00000460893 NT5C3B-006 41828790-41836223 retained_intron
  ENST00000469698 NT5C3B-004 41825181-41836202 retained_intron
  ENST00000470690 NT5C3B-005 41825227-41836228 retained_intron
  ENST00000475053 NT5C3B-003 41828830-41836246 nonsense_mediated_decay
  ENST00000476921 NT5C3B-014 41827426-41836227 retained_intron
  ENST00000481693 NT5C3B-012 41828805-41832666 retained_intron
  ENST00000486304 NT5C3B-013 41828322-41830880 protein_coding
  ENST00000495317 NT5C3B-010 41828905-41836203 retained_intron
  ENST00000517701 NT5C3B-016 41825181-41832488 retained_intron
  ENST00000520442 NT5C3B-018 41835082-41835498 retained_intron
  ENST00000521789 NT5C3B-017 41825200-41836260 protein_coding
  ENST00000523903 NT5C3B-001 41825181-41836258 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393910ENST00000415460ENST00000435506ENST00000445655ENST00000469698ENST00000470690ENST00000475053ENST00000476921ENST00000481693ENST00000517701ENST00000523903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393910 6.792±0.00 12.767±0.00 N/A 8.021±0.00 7.424±0.00 12.033±0.00 N/A 10.861±0.00 4.245±0.00 5.796±0.00 1.360±0.72 6.213±0.00 6.249±0.00 21.080±0.00
ENST00000415460 N/A N/A N/A N/A N/A 1.622±0.00 N/A N/A 1.460±0.00 N/A 1.267±0.00 N/A N/A N/A
ENST00000435506 10.710±0.00 7.246±0.00 N/A 11.925±0.00 8.274±0.00 12.102±0.00 2.399±1.91 6.511±0.00 1.456±0.52 2.858±0.00 N/A 13.830±8.95 9.807±0.00 35.163±10.21
ENST00000445655 N/A N/A N/A 7.546±0.00 2.355±0.00 1.034±0.00 0.403±0.00 N/A 1.062±0.00 1.183±0.00 1.101±0.00 N/A N/A N/A
ENST00000469698 4.009±0.00 N/A 0.386±0.00 N/A N/A N/A N/A N/A 1.608±0.00 3.732±0.00 N/A N/A 3.078±0.12 N/A
ENST00000470690 N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475053 N/A N/A 1.803±0.00 N/A N/A N/A N/A N/A N/A N/A 0.556±0.00 N/A N/A N/A
ENST00000476921 N/A N/A N/A N/A 1.039±0.00 N/A N/A N/A 1.493±0.00 1.727±0.00 N/A 10.350±0.00 N/A N/A
ENST00000481693 N/A N/A N/A N/A N/A N/A 1.183±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000517701 8.545±0.00 12.772±0.00 1.078±0.00 15.495±0.00 4.518±0.00 14.377±0.00 3.598±0.00 8.749±0.00 5.269±0.00 6.540±0.00 4.061±0.00 18.809±8.55 6.335±0.00 25.916±0.00
ENST00000523903 N/A N/A 0.457±0.00 10.426±0.00 4.124±0.87 1.295±0.00 4.287±0.00 5.677±0.00 1.663±0.00 2.336±0.00 1.346±0.00 9.825±2.42 6.025±1.82 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BM CIL_0007BM_0001 CGP 17:41812680-41836263
CIL_00050F CIL_00050F_0001 CGP 17:41825181-41848384

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008253 IEA 5'-nucleotidase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000017176 Nt5c3b 5'-nucleotidase, cytosolic IIIB protein_coding Mus_musculus

Loading