C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141858 SAMD1 9606 - 19:14087840-14091036 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269724 SAMD1-002 14088429-14091036 protein_coding
  ENST00000533683 SAMD1-001 14087840-14090708 protein_coding
  ENST00000541938 SAMD1-003 14090509-14091013 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269724ENST00000533683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269724 4.871±0.00 N/A N/A N/A 4.977±0.00 N/A N/A N/A N/A N/A N/A 22.339±0.00 N/A N/A
ENST00000533683 15.274±0.00 10.617±0.00 0.498±0.00 9.981±7.65 7.498±6.07 15.065±13.31 6.955±6.36 9.077±8.25 3.091±1.49 10.195±8.57 14.532±13.65 15.077±10.55 15.492±2.14 18.839±6.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059598 samd1a sterile alpha motif domain containing 1a protein_coding Danio_rerio
ENSDARG00000079062 samd1b sterile alpha motif domain containing 1b protein_coding Danio_rerio
ENSMUSG00000079003 Samd1 sterile alpha motif domain containing 1 protein_coding Mus_musculus

Loading