C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidic acid phosphatase type 2C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141934 PPAP2C 9606 - 19:281040-291504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269812 PPAP2C-003 281043-291393 protein_coding
  ENST00000327790 PPAP2C-004 281040-291185 protein_coding
  ENST00000434325 PPAP2C-001 281040-291504 protein_coding
  ENST00000586998 PPAP2C-005 282056-287636 protein_coding
  ENST00000589672 PPAP2C-006 287161-288530 retained_intron
  ENST00000591572 PPAP2C-002 282775-291382 protein_coding
  ENST00000621795 PPAP2C-007 281046-288537 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269812ENST00000327790ENST00000434325ENST00000586998ENST00000589672ENST00000591572ENST00000621795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269812 N/A 1.602±0.00 0.070±0.00 1.878±0.00 N/A N/A N/A 2.346±0.00 1.048±0.00 2.960±2.77 N/A 1.489±1.12 3.922±2.35 1.870±1.11
ENST00000327790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.089±0.00 N/A 1.429±0.00
ENST00000434325 1.967±0.00 N/A N/A 9.796±0.00 12.458±0.00 7.670±0.00 N/A N/A 0.445±0.00 7.150±0.00 N/A 8.379±3.04 5.796±5.45 6.787±0.00
ENST00000586998 N/A N/A N/A N/A N/A 3.866±0.00 N/A N/A 0.698±0.00 N/A N/A N/A N/A 1.739±0.00
ENST00000589672 N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591572 N/A N/A N/A N/A N/A N/A N/A N/A 0.675±0.00 3.703±2.30 0.654±0.00 N/A 2.186±0.00 N/A
ENST00000621795 0.147±0.00 0.487±0.00 N/A 0.920±0.76 0.697±0.43 N/A 0.178±0.00 0.191±0.00 N/A 0.129±0.04 0.039±0.00 0.217±0.12 N/A 0.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I8 CIL_0007I8_0001 CGP 19:281040-344807

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004721 TAS phosphoprotein phosphatase activity
GO:0005886 TAS plasma membrane
GO:0006665 TAS sphingolipid metabolic process
GO:0008195 IEA phosphatidate phosphatase activity
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0030148 TAS sphingolipid biosynthetic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002231 PPAP2C (1 of 2) phosphatidic acid phosphatase type 2C protein_coding Danio_rerio
ENSDARG00000028896 ppap2c phosphatidic acid phosphatase type 2C protein_coding Danio_rerio
ENSMUSG00000052151 Ppap2c phosphatidic acid phosphatase type 2C protein_coding Mus_musculus

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