C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATH1, acid trehalase-like 1 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142102 ATHL1 9606 + 11:289135-296107 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000397660 ATHL1-008 293679-294732 protein_coding
  ENST00000409479 ATHL1-002 289559-295258 protein_coding
  ENST00000409548 ATHL1-004 289138-296107 protein_coding
  ENST00000409655 ATHL1-001 289172-295676 protein_coding
  ENST00000474221 ATHL1-003 289135-295678 retained_intron
  ENST00000476372 ATHL1-005 291560-295683 retained_intron
  ENST00000482937 ATHL1-007 289920-292576 nonsense_mediated_decay
  ENST00000529087 ATHL1-006 289178-290800 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397660ENST00000409479ENST00000409548ENST00000409655ENST00000474221ENST00000476372ENST00000482937ENST00000529087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397660 3.691±0.00 N/A N/A N/A N/A 1.172±0.00 1.786±0.00 N/A N/A N/A 2.534±0.00 59.083±0.00 2.151±0.00 N/A
ENST00000409479 0.953±0.00 N/A N/A N/A 1.901±0.00 N/A 0.564±0.00 0.159±0.00 0.663±0.43 0.767±0.00 N/A 5.376±0.00 1.463±0.32 1.808±1.20
ENST00000409548 N/A N/A N/A N/A 0.435±0.00 N/A N/A N/A 1.067±0.00 N/A N/A N/A 1.360±0.00 N/A
ENST00000409655 N/A N/A N/A N/A N/A N/A 0.314±0.00 0.627±0.00 N/A N/A N/A 12.395±9.77 0.955±0.40 2.183±1.72
ENST00000474221 0.718±0.00 N/A 0.186±0.00 0.229±0.03 1.305±0.00 1.293±0.00 0.228±0.00 5.588±0.00 N/A 0.972±0.00 0.107±0.00 1.546±1.40 0.924±0.28 2.205±1.62
ENST00000476372 1.265±0.00 7.201±0.00 N/A 0.426±0.00 1.914±0.00 1.473±0.00 0.189±0.13 7.052±0.00 N/A 9.264±0.00 N/A 3.749±2.59 0.907±0.30 0.509±0.00
ENST00000482937 N/A N/A N/A N/A N/A 0.826±0.00 N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A
ENST00000529087 N/A N/A N/A 0.901±0.00 N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0001 CGP 11:278365-296107
CIL_0002B6 CIL_0002B6_0001 CGP 11:289135-299526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005975 IEA carbohydrate metabolic process
GO:0016798 IEA hydrolase activity, acting on glycosyl bonds

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014311 athl1 ATH1, acid trehalase-like 1 (yeast) protein_coding Danio_rerio
ENSMUSG00000062031 Athl1 ATH1, acid trehalase-like 1 (yeast) protein_coding Mus_musculus

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