C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin beta 3 binding protein (beta3-endonexin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142856 ITGB3BP 9606 - 1:63440770-63593721 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000271002 ITGB3BP-017 63440773-63523215 protein_coding
  ENST00000371092 ITGB3BP-008 63440773-63523194 protein_coding
  ENST00000460251 ITGB3BP-015 63457684-63523201 processed_transcript
  ENST00000460394 ITGB3BP-011 63451725-63523182 processed_transcript
  ENST00000461681 ITGB3BP-018 63440800-63457695 processed_transcript
  ENST00000462285 ITGB3BP-010 63453615-63523209 processed_transcript
  ENST00000463803 ITGB3BP-013 63442510-63454949 processed_transcript
  ENST00000465781 ITGB3BP-007 63457465-63523201 processed_transcript
  ENST00000476508 ITGB3BP-019 63449303-63490214 processed_transcript
  ENST00000478138 ITGB3BP-009 63490103-63593721 processed_transcript
  ENST00000478538 ITGB3BP-016 63446558-63447789 processed_transcript
  ENST00000489099 ITGB3BP-014 63440773-63523502 nonsense_mediated_decay
  ENST00000489863 ITGB3BP-006 63453776-63523255 processed_transcript
  ENST00000492655 ITGB3BP-012 63440770-63447060 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000271002
Transcript ID Brain Ovary
ENST00000271002 4.536±0.00 11.496±4.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KW CIL_0007KW_0001 UCNEbase 1:62876629-63449336
CIL_0008AH CIL_0008AH_0001 VISTA 1:62899548-63500451
CIL_0002G7 CIL_0002G7_0001 CGP 1:63367590-63593721
CIL_0002G6 CIL_0002G6_0001 CGP 1:63440770-63593721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0004871 TAS signal transducer activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006334 TAS nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007067 IEA mitotic nuclear division
GO:0007155 TAS cell adhesion
GO:0007165 TAS signal transduction
GO:0008022 TAS protein C-terminus binding
GO:0016020 TAS membrane
GO:0034080 TAS:IEA CENP-A containing nucleosome assembly
GO:0043065 TAS positive regulation of apoptotic process
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000028549 Itgb3bp integrin beta 3 binding protein (beta3-endonexin) protein_coding Mus_musculus

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