C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vasohibin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143494 VASH2 9606 + 1:212950520-212992037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000271776 VASH2-006 212950641-212974927 processed_transcript
  ENST00000366964 VASH2-201 212950618-212969249 protein_coding
  ENST00000366965 VASH2-005 212950635-212990910 protein_coding
  ENST00000366966 VASH2-011 212950520-212988698 protein_coding
  ENST00000366967 VASH2-002 212950667-212988924 protein_coding
  ENST00000366968 VASH2-001 212950594-212991585 protein_coding
  ENST00000366969 VASH2-010 212966957-212972918 processed_transcript
  ENST00000481097 VASH2-007 212961227-212966155 retained_intron
  ENST00000490792 VASH2-009 212950595-212951812 protein_coding
  ENST00000493155 VASH2-008 212951528-212952791 processed_transcript
  ENST00000517399 VASH2-013 212951543-212988584 protein_coding
  ENST00000519906 VASH2-012 212989127-212992037 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000271776ENST00000366964ENST00000366965ENST00000366966ENST00000366967ENST00000366968ENST00000481097ENST00000519906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000271776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.258±0.41
ENST00000366964 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366965 N/A N/A 0.030±0.00 0.068±0.00 0.365±0.00 0.065±0.01 0.088±0.00 N/A 0.365±0.00 0.067±0.00 0.047±0.02 0.211±0.00 0.083±0.00 0.558±0.21
ENST00000366966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.330±0.00
ENST00000366967 N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A 1.641±0.00
ENST00000366968 0.243±0.00 0.413±0.00 N/A N/A 0.277±0.09 N/A 0.147±0.00 0.072±0.00 0.043±0.04 0.313±0.00 N/A 0.656±0.00 0.190±0.00 N/A
ENST00000481097 N/A N/A N/A N/A 1.581±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519906 N/A N/A 0.378±0.00 N/A N/A N/A N/A 0.367±0.00 0.259±0.00 N/A 0.336±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000124 CIL_000124_0002 CGP 1:212858255-212992037
CIL_000125 CIL_000125_0002 CGP 1:212950520-213015826

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001938 IDA positive regulation of endothelial cell proliferation
GO:0005737 IDA cytoplasm
GO:0045766 IDA positive regulation of angiogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007774 vash2 vasohibin 2 protein_coding Danio_rerio
ENSMUSG00000037568 Vash2 vasohibin 2 protein_coding Mus_musculus

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