C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cornichon family AMPA receptor auxiliary protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143771 CNIH4 9606 + 1:224356850-224379459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366856 CNIH4-005 224356893-224379452 protein_coding
  ENST00000366857 CNIH4-002 224356871-224379452 protein_coding
  ENST00000366858 CNIH4-004 224356858-224379452 protein_coding
  ENST00000366860 CNIH4-006 224356887-224375998 processed_transcript
  ENST00000465271 CNIH4-001 224356850-224379452 protein_coding
  ENST00000468318 CNIH4-003 224356888-224376884 processed_transcript
  ENST00000469200 CNIH4-008 224377051-224379459 processed_transcript
  ENST00000477413 CNIH4-007 224356921-224371297 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366856ENST00000366857ENST00000366860ENST00000465271ENST00000468318
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366856 14.805±0.00 8.446±0.00 0.917±0.00 N/A 8.949±0.00 8.476±0.00 2.987±2.06 5.895±4.37 4.239±0.00 9.595±0.00 2.896±0.79 10.058±5.07 6.854±0.30 7.624±1.65
ENST00000366857 1.041±0.00 N/A N/A N/A 0.895±0.00 N/A 0.134±0.00 0.895±0.00 0.740±0.00 N/A N/A 0.677±0.00 0.816±0.00 N/A
ENST00000366860 9.084±0.00 5.873±0.00 N/A N/A 5.509±0.00 6.380±0.00 4.539±0.00 4.739±0.00 4.679±0.00 12.290±0.00 2.363±0.00 5.649±1.93 5.628±1.20 5.163±1.17
ENST00000465271 2.513±0.00 1.863±0.00 1.149±0.00 2.752±0.29 1.627±0.24 1.639±0.39 0.918±0.44 3.594±0.00 0.836±0.34 1.668±0.57 1.332±0.60 2.124±1.88 1.706±0.52 1.287±0.43
ENST00000468318 N/A N/A N/A 1.596±0.88 1.806±0.01 3.339±1.04 1.805±0.00 3.442±2.30 1.701±0.41 2.192±0.00 1.632±0.00 2.113±0.60 4.185±1.20 2.138±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0001 VISTA 1:224201914-224806293
CIL_0005S3 CIL_0005S3_0001 CGP 1:224227334-224379459
CIL_0000C0 CIL_0000C0_0002 CGP 1:224356850-224437033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087759 cnih4 cornichon homolog 4 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000062169 Cnih4 cornichon homolog 4 (Drosophila) protein_coding Mus_musculus

Loading