C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell division cycle associated 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144354 CDCA7 9606 + 2:173354820-173368997 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306721 CDCA7-001 173354861-173368997 protein_coding
  ENST00000347703 CDCA7-002 173354820-173368904 protein_coding
  ENST00000410019 CDCA7-004 173354872-173368070 protein_coding
  ENST00000410101 CDCA7-003 173354872-173367720 protein_coding
  ENST00000435616 CDCA7-007 173354888-173364873 nonsense_mediated_decay
  ENST00000467411 CDCA7-006 173354893-173368904 retained_intron
  ENST00000468359 CDCA7-008 173358507-173365516 retained_intron
  ENST00000496441 CDCA7-005 173354872-173368500 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306721ENST00000347703ENST00000410019ENST00000410101ENST00000435616ENST00000467411ENST00000496441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306721 N/A N/A N/A 0.025±0.00 0.119±0.00 1.917±0.00 N/A N/A N/A N/A 0.416±0.30 3.888±3.67 0.576±0.05 1.222±0.69
ENST00000347703 0.294±0.00 0.502±0.00 N/A 0.280±0.00 0.477±0.00 0.559±0.00 N/A 0.162±0.00 0.012±0.00 0.374±0.00 N/A 14.138±7.11 2.083±1.19 3.222±0.00
ENST00000410019 0.337±0.00 N/A N/A N/A N/A N/A 0.220±0.11 0.079±0.00 N/A 0.292±0.05 0.760±0.00 0.250±0.00 N/A 2.470±0.00
ENST00000410101 N/A 0.803±0.00 N/A N/A N/A N/A N/A N/A N/A 0.341±0.00 0.565±0.00 40.278±0.00 3.354±0.00 2.446±0.00
ENST00000435616 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467411 N/A 0.201±0.00 N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496441 N/A N/A N/A N/A N/A N/A 0.066±0.03 N/A N/A N/A N/A 6.799±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JV CIL_0008JV_0001 VISTA 2:172949643-173551205
CIL_0004KE CIL_0004KE_0001 CGP 2:173075435-173368997
CIL_0007OE CIL_0007OE_0001 UCNEbase 2:173198009-174351945
CIL_0004JD CIL_0004JD_0001 CGP 2:173354820-173965702

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0042127 IDA regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077620 cdca7a cell division cycle associated 7a protein_coding Danio_rerio
ENSMUSG00000055612 Cdca7 cell division cycle associated 7 protein_coding Mus_musculus

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