C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mucin 4, cell surface associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145113 MUC4 9606 - 3:195746765-195812277 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308466 MUC4-016 195746765-195778810 nonsense_mediated_decay
  ENST00000339251 MUC4-018 195746765-195778810 nonsense_mediated_decay
  ENST00000346145 MUC4-015 195746765-195811857 protein_coding
  ENST00000349607 MUC4-014 195746765-195811857 protein_coding
  ENST00000392407 MUC4-022 195746765-195778810 nonsense_mediated_decay
  ENST00000415455 MUC4-019 195746765-195778810 nonsense_mediated_decay
  ENST00000448861 MUC4-017 195746765-195778810 nonsense_mediated_decay
  ENST00000462323 MUC4-012 195747058-195811889 nonsense_mediated_decay
  ENST00000463781 MUC4-001 195746765-195812277 protein_coding
  ENST00000464234 MUC4-024 195747173-195753994 retained_intron
  ENST00000466475 MUC4-006 195747058-195811889 nonsense_mediated_decay
  ENST00000467235 MUC4-023 195749856-195752520 retained_intron
  ENST00000469992 MUC4-026 195750607-195753103 retained_intron
  ENST00000470451 MUC4-011 195747058-195811889 nonsense_mediated_decay
  ENST00000475231 MUC4-007 195747058-195811889 protein_coding
  ENST00000477086 MUC4-008 195747058-195811889 nonsense_mediated_decay
  ENST00000477756 MUC4-013 195747058-195811889 nonsense_mediated_decay
  ENST00000478156 MUC4-003 195746765-195811889 nonsense_mediated_decay
  ENST00000478685 MUC4-002 195809644-195811973 processed_transcript
  ENST00000479406 MUC4-004 195747058-195811889 nonsense_mediated_decay
  ENST00000480843 MUC4-009 195747058-195811889 nonsense_mediated_decay
  ENST00000486425 MUC4-025 195766662-195769688 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308466ENST00000339251ENST00000346145ENST00000349607ENST00000415455ENST00000462323ENST00000463781ENST00000464234ENST00000467235ENST00000469992ENST00000470451ENST00000475231ENST00000477756ENST00000478156ENST00000479406ENST00000480843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.590±0.00 0.071±0.00 N/A
ENST00000339251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.886±0.00 N/A 0.431±0.00
ENST00000346145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.434±0.00 N/A N/A
ENST00000349607 N/A N/A N/A N/A N/A 1.476±0.00 N/A N/A N/A N/A N/A 0.305±0.00 0.037±0.00 N/A
ENST00000415455 N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A 0.196±0.00 3.058±0.00 N/A N/A 0.067±0.00 N/A
ENST00000462323 N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.020±0.00 N/A 1.078±0.00 N/A N/A 0.003±0.00 N/A
ENST00000463781 N/A N/A 0.043±0.00 N/A 1.872±0.00 1.670±1.48 N/A N/A N/A N/A N/A 0.298±0.00 0.004±0.00 N/A
ENST00000464234 0.014±0.00 N/A N/A 0.131±0.00 N/A N/A 0.015±0.00 N/A 0.051±0.00 N/A N/A 1.220±0.00 N/A N/A
ENST00000467235 0.007±0.00 0.021±0.00 0.359±0.00 0.111±0.04 N/A N/A N/A N/A N/A N/A N/A 0.701±0.00 N/A N/A
ENST00000469992 N/A N/A 1.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470451 N/A 0.002±0.00 N/A 0.087±0.08 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.006±0.00 N/A
ENST00000475231 N/A N/A N/A N/A 1.687±0.00 0.288±0.00 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A
ENST00000477756 N/A N/A N/A N/A N/A 5.791±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478156 N/A N/A N/A N/A 2.197±2.18 3.867±0.00 N/A N/A N/A N/A N/A 0.309±0.00 0.046±0.00 0.180±0.00
ENST00000479406 N/A 0.003±0.00 N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A 0.005±0.00 N/A 0.010±0.00 N/A
ENST00000480843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005176 TAS ErbB-2 class receptor binding
GO:0005515 IEA protein binding
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005796 TAS Golgi lumen
GO:0005887 TAS integral component of plasma membrane
GO:0007160 IEA cell-matrix adhesion
GO:0016020 NAS membrane
GO:0016266 TAS O-glycan processing
GO:0030197 NAS extracellular matrix constituent, lubricant activity
GO:0030277 IMP maintenance of gastrointestinal epithelium
GO:0031982 IDA vesicle
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087190 MUC4 mucin 4, cell surface associated protein_coding Danio_rerio
ENSMUSG00000079620 Muc4 mucin 4 protein_coding Mus_musculus

Loading