C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 26 (anion exchanger), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145217 SLC26A1 9606 - 4:979073-993440 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361661 SLC26A1-001 987657-993436 protein_coding
  ENST00000398516 SLC26A1-002 987997-993440 protein_coding
  ENST00000398520 SLC26A1-003 979073-993376 protein_coding
  ENST00000513138 SLC26A1-004 990621-991195 processed_transcript
  ENST00000622731 SLC26A1-201 979406-993440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLungTestisENST00000361661ENST00000398516ENST00000398520ENST00000622731
Transcript ID Brain Breast Colon Heart Kidney Lung Testis
ENST00000361661 0.143±0.00 N/A N/A N/A 0.262±0.00 N/A N/A
ENST00000398516 N/A 0.126±0.00 0.080±0.00 0.279±0.00 2.161±0.00 0.214±0.00 1.112±0.00
ENST00000398520 0.458±0.00 N/A N/A N/A N/A N/A N/A
ENST00000622731 N/A N/A 0.207±0.00 0.106±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LQ CIL_0006LQ_0001 CGP 4:932387-986895

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0006811 TAS ion transport
GO:0006821 ISS chloride transport
GO:0008271 IEA secondary active sulfate transmembrane transporter activity
GO:0008272 ISS:IEA sulfate transport
GO:0015108 ISS chloride transmembrane transporter activity
GO:0015116 ISS:IEA sulfate transmembrane transporter activity
GO:0015301 ISS anion:anion antiporter activity
GO:0016020 IEA membrane
GO:0016021 TAS:IEA integral component of membrane
GO:0019531 ISS oxalate transmembrane transporter activity
GO:0019532 ISS oxalate transport
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050427 TAS 3'-phosphoadenosine 5'-phosphosulfate metabolic process
GO:0050428 TAS 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process
GO:0055085 TAS:IEA transmembrane transport
GO:1902358 IEA sulfate transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029832 slc26a1 solute carrier family 26 (sulfate transporter), member 1 protein_coding Danio_rerio
ENSMUSG00000046959 Slc26a1 solute carrier family 26 (sulfate transporter), member 1 protein_coding Mus_musculus

Loading