C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class V, type 10D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145246 ATP10D 9606 + 4:47485288-47593486 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273859 ATP10D-001 47485288-47593486 protein_coding
  ENST00000503288 ATP10D-003 47536480-47592891 nonsense_mediated_decay
  ENST00000504445 ATP10D-002 47485299-47547564 protein_coding
  ENST00000505277 ATP10D-010 47582031-47591295 processed_transcript
  ENST00000505476 ATP10D-008 47578312-47591103 processed_transcript
  ENST00000507889 ATP10D-005 47485297-47512846 retained_intron
  ENST00000512393 ATP10D-009 47580399-47583315 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273859ENST00000503288ENST00000504445ENST00000505277ENST00000507889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273859 1.203±0.00 0.331±0.00 N/A N/A N/A 0.402±0.00 0.906±0.00 N/A N/A N/A N/A 1.272±0.59 3.539±0.50 1.015±0.79
ENST00000503288 1.470±0.00 1.727±0.00 3.053±0.00 0.317±0.00 2.158±0.31 1.585±0.83 0.858±0.35 3.462±0.00 1.200±0.45 2.106±0.37 0.277±0.04 2.009±1.02 5.240±2.23 1.503±0.61
ENST00000504445 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.278±0.00 N/A N/A N/A N/A
ENST00000505277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.417±0.00 N/A N/A N/A
ENST00000507889 N/A N/A N/A 3.977±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LH CIL_0005LH_0002 CGP 4:47450796-47593486

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 NAS:IEA magnesium ion binding
GO:0004012 NAS:IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 NAS:IEA ATP binding
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0006812 NAS cation transport
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 NAS:IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0034220 TAS ion transmembrane transport
GO:0045332 NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078887 atp10d ATPase, class V, type 10D protein_coding Danio_rerio

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