C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipoma HMGIC fusion partner-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145685 LHFPL2 9606 - 5:78485215-78770021 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380345 LHFPL2-201 78485217-78648825 protein_coding
  ENST00000502722 LHFPL2-007 78488812-78491306 processed_transcript
  ENST00000503686 LHFPL2-005 78510000-78648617 processed_transcript
  ENST00000510949 LHFPL2-003 78510039-78590192 processed_transcript
  ENST00000512759 LHFPL2-004 78510027-78648895 processed_transcript
  ENST00000514587 LHFPL2-008 78632260-78770021 processed_transcript
  ENST00000515007 LHFPL2-001 78485215-78549151 protein_coding
  ENST00000515349 LHFPL2-006 78624817-78642162 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380345ENST00000515007ENST00000515349
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380345 10.090±0.00 1.186±0.00 0.915±0.00 2.851±0.00 3.314±1.60 3.551±0.33 1.313±0.00 1.334±0.00 2.348±0.00 3.085±0.00 0.546±0.00 4.720±3.74 4.000±1.05 4.651±2.80
ENST00000515007 N/A N/A N/A 0.964±0.56 2.072±0.00 N/A 1.266±0.00 1.677±0.53 1.832±0.00 4.422±0.00 0.676±0.00 3.850±0.40 2.884±0.00 1.211±0.00
ENST00000515349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077A CIL_00077A_0002 CGP 5:78485215-78986087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009653 lhfpl2a lipoma HMGIC fusion partner-like 2a protein_coding Danio_rerio
ENSDARG00000039926 lhfpl2b lipoma HMGIC fusion partner-like 2b protein_coding Danio_rerio
ENSDARG00000071509 lhfpl2b lipoma HMGIC fusion partner-like 2b protein_coding Danio_rerio
ENSMUSG00000045312 Lhfpl2 lipoma HMGIC fusion partner-like 2 protein_coding Mus_musculus

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