C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145817 YIPF5 9606 - 5:144158159-144170714 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274496 YIPF5-001 144158159-144170659 protein_coding
  ENST00000448443 YIPF5-002 144159273-144170630 protein_coding
  ENST00000508754 YIPF5-006 144163863-144170640 retained_intron
  ENST00000513112 YIPF5-003 144159273-144170630 protein_coding
  ENST00000519064 YIPF5-008 144160478-144170635 protein_coding
  ENST00000522203 YIPF5-009 144162362-144170714 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274496ENST00000448443ENST00000508754ENST00000513112ENST00000519064ENST00000522203
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274496 5.303±0.00 1.944±0.00 1.943±0.00 4.312±0.12 2.709±2.27 4.577±0.54 1.359±0.52 4.062±2.60 2.802±0.61 3.450±1.31 2.386±0.00 3.666±1.23 8.061±1.94 5.812±1.82
ENST00000448443 4.705±0.00 4.448±0.00 N/A 1.580±0.05 2.329±0.00 3.371±0.00 2.269±1.25 6.340±0.00 3.092±1.23 3.155±0.00 0.646±0.45 2.994±2.24 10.586±0.06 2.950±0.45
ENST00000508754 N/A N/A N/A N/A 2.497±0.00 2.827±0.00 1.121±0.00 N/A N/A N/A 2.264±0.00 2.289±0.00 N/A N/A
ENST00000513112 3.709±0.00 5.052±0.00 N/A 2.111±0.00 6.387±0.00 N/A N/A 0.487±0.00 N/A N/A N/A N/A 4.373±0.00 2.108±0.45
ENST00000519064 N/A N/A N/A N/A N/A N/A N/A 1.738±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522203 N/A N/A N/A N/A 1.983±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IS CIL_0001IS_0002 CGP 5:144158159-144485686

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030134 IEA ER to Golgi transport vesicle
GO:0042175 IEA nuclear outer membrane-endoplasmic reticulum membrane network
GO:0060628 IEA regulation of ER to Golgi vesicle-mediated transport
GO:0070971 IEA endoplasmic reticulum exit site

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007279 yipf5 Yip1 domain family, member 5 protein_coding Danio_rerio
ENSMUSG00000024487 Yipf5 Yip1 domain family, member 5 protein_coding Mus_musculus

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