C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25, member 48
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145832 SLC25A48 9606 + 5:135834649-135888637 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274513 SLC25A48-001 135834676-135872747 protein_coding
  ENST00000412661 SLC25A48-003 135834727-135888637 protein_coding
  ENST00000425402 SLC25A48-002 135834649-135876380 protein_coding
  ENST00000433282 SLC25A48-005 135834714-135880131 protein_coding
  ENST00000462340 SLC25A48-004 135835104-135871625 nonsense_mediated_decay
  ENST00000471980 SLC25A48-006 135880029-135883450 processed_transcript
  ENST00000510147 SLC25A48-008 135879973-135883450 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274513ENST00000412661ENST00000425402ENST00000433282ENST00000462340ENST00000471980ENST00000510147
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274513 N/A N/A 0.571±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00
ENST00000412661 N/A N/A N/A 2.723±0.00 0.113±0.00 N/A N/A 1.101±0.00 0.211±0.00 N/A N/A N/A N/A N/A
ENST00000425402 0.034±0.00 0.097±0.00 0.515±0.00 0.604±0.00 0.094±0.00 0.095±0.00 0.051±0.00 0.219±0.00 N/A 0.028±0.00 0.025±0.00 N/A N/A 0.119±0.00
ENST00000433282 0.076±0.00 0.140±0.00 N/A 3.818±0.00 N/A N/A N/A 1.017±0.00 0.095±0.00 N/A N/A 0.059±0.00 0.122±0.00 0.146±0.00
ENST00000462340 0.300±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A 0.267±0.00 N/A
ENST00000471980 N/A N/A N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A N/A N/A 0.156±0.00 0.215±0.13
ENST00000510147 0.357±0.00 N/A 1.198±0.00 1.983±0.70 N/A N/A N/A 1.611±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XZ CIL_0005XZ_0001 CGP 5:135834649-135895827

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021250 slc25a48 solute carrier family 25, member 48 protein_coding Danio_rerio
ENSMUSG00000021509 Slc25a48 solute carrier family 25, member 48 protein_coding Mus_musculus

Loading