C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NHP2 ribonucleoprotein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145912 NHP2 9606 - 5:178149460-178153967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274606 NHP2-001 178149460-178153967 protein_coding
  ENST00000314397 NHP2-002 178149482-178153829 protein_coding
  ENST00000502263 NHP2-004 178150531-178153579 protein_coding
  ENST00000510363 NHP2-006 178153222-178153884 retained_intron
  ENST00000511078 NHP2-005 178150826-178153894 protein_coding
  ENST00000514354 NHP2-003 178150639-178153882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274606ENST00000314397ENST00000511078ENST00000514354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274606 42.685±0.00 52.021±0.00 3.349±0.00 27.976±16.88 18.414±14.60 38.387±0.00 14.472±12.44 21.841±16.55 20.360±13.47 19.760±16.87 21.073±15.84 44.489±33.58 61.882±28.83 49.058±0.00
ENST00000314397 N/A 33.587±0.00 N/A N/A N/A 17.680±0.00 N/A 28.620±0.00 N/A N/A N/A 17.622±0.00 N/A N/A
ENST00000511078 N/A N/A N/A 5.765±0.00 5.310±0.00 10.548±0.00 N/A N/A N/A N/A 4.817±0.00 5.711±0.00 N/A N/A
ENST00000514354 N/A N/A N/A 5.760±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus
GO:0005732 ISS small nucleolar ribonucleoprotein complex
GO:0005737 IDA cytoplasm
GO:0030515 ISS snoRNA binding
GO:0031118 ISS rRNA pseudouridine synthesis
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069422 nhp2 NHP2 ribonucleoprotein homolog (yeast) protein_coding Danio_rerio
ENSMUSG00000001056 Nhp2 NHP2 ribonucleoprotein protein_coding Mus_musculus

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