C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145979 TBC1D7 9606 - 6:13266542-13328583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343141 TBC1D7-201 13304954-13328583 protein_coding
  ENST00000356436 TBC1D7-008 13304951-13328531 protein_coding
  ENST00000379291 TBC1D7-011 13316698-13328531 protein_coding
  ENST00000379300 TBC1D7-009 13304951-13328531 protein_coding
  ENST00000379307 TBC1D7-202 13304954-13328583 protein_coding
  ENST00000416436 TBC1D7-001 13316682-13328130 protein_coding
  ENST00000420456 TBC1D7-003 13307600-13327818 protein_coding
  ENST00000421203 TBC1D7-014 13274849-13328544 nonsense_mediated_decay
  ENST00000422136 TBC1D7-004 13306445-13328531 protein_coding
  ENST00000428109 TBC1D7-002 13316621-13328130 protein_coding
  ENST00000446018 TBC1D7-006 13306491-13328531 protein_coding
  ENST00000450347 TBC1D7-010 13306398-13328531 protein_coding
  ENST00000452989 TBC1D7-005 13306398-13328531 protein_coding
  ENST00000606214 TBC1D7-012 13266542-13326912 protein_coding
  ENST00000606370 TBC1D7-013 13318718-13328555 protein_coding
  ENST00000606530 TBC1D7-016 13326838-13328332 protein_coding
  ENST00000606541 TBC1D7-018 13320832-13326912 protein_coding
  ENST00000607208 TBC1D7-017 13307714-13320981 processed_transcript
  ENST00000607230 TBC1D7-015 13323711-13328583 protein_coding
  ENST00000607532 TBC1D7-019 13306645-13328544 processed_transcript
  ENST00000607658 TBC1D7-020 13305618-13328458 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000343141ENST00000356436ENST00000379300ENST00000379307ENST00000422136ENST00000606214ENST00000606370ENST00000607208
Transcript ID Adipose Bladder Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000343141 N/A N/A N/A N/A 0.671±0.00 N/A N/A N/A N/A N/A
ENST00000356436 3.912±0.00 N/A 6.895±0.00 3.711±0.00 9.177±0.00 2.429±0.00 N/A 8.176±3.27 6.788±2.39 12.253±2.76
ENST00000379300 N/A N/A N/A N/A N/A 0.996±0.00 1.809±0.00 N/A 2.252±0.43 N/A
ENST00000379307 N/A N/A N/A N/A N/A 2.717±0.00 N/A 4.095±0.00 3.662±0.00 N/A
ENST00000422136 N/A N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A N/A
ENST00000606214 N/A 1.399±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606370 N/A N/A 1.133±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000607208 N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.948±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IC CIL_0003IC_0001 CGP 6:12290363-13290484
CIL_0001BV CIL_0001BV_0002 CGP 6:12716805-13328583
CIL_0008MO CIL_0008MO_0001 VISTA 6:13058507-13660102
CIL_0003IB CIL_0003IB_0001 CGP 6:13266542-13487662

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IDA:IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0017137 IPI Rab GTPase binding
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0031410 IDA cytoplasmic vesicle
GO:0032007 IMP negative regulation of TOR signaling
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0032862 IMP activation of Rho GTPase activity
GO:0033126 IDA positive regulation of GTP catabolic process
GO:0036064 IDA ciliary basal body
GO:0070848 IMP response to growth factor
GO:1902018 IMP negative regulation of cilium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029581 tbc1d7 TBC1 domain family, member 7 protein_coding Danio_rerio
ENSMUSG00000021368 Tbc1d7 TBC1 domain family, member 7 protein_coding Mus_musculus

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