C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 193, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146067 FAM193B 9606 - 5:177519788-177554541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000502403 FAM193B-014 177537987-177539351 protein_coding
  ENST00000504130 FAM193B-009 177519931-177522999 processed_transcript
  ENST00000505241 FAM193B-008 177523180-177524421 processed_transcript
  ENST00000505569 FAM193B-006 177519789-177525487 retained_intron
  ENST00000506064 FAM193B-012 177531338-177532612 processed_transcript
  ENST00000506432 FAM193B-019 177538085-177553266 protein_coding
  ENST00000506879 FAM193B-017 177519791-177522162 retained_intron
  ENST00000506955 FAM193B-001 177519790-177554541 nonsense_mediated_decay
  ENST00000507212 FAM193B-007 177520056-177524494 nonsense_mediated_decay
  ENST00000507587 FAM193B-016 177538911-177554347 nonsense_mediated_decay
  ENST00000508298 FAM193B-018 177525197-177554458 processed_transcript
  ENST00000510163 FAM193B-005 177519791-177536390 nonsense_mediated_decay
  ENST00000510429 FAM193B-015 177538006-177553766 protein_coding
  ENST00000510479 FAM193B-002 177519790-177539066 nonsense_mediated_decay
  ENST00000513282 FAM193B-010 177519789-177524013 nonsense_mediated_decay
  ENST00000513502 FAM193B-011 177525054-177531834 retained_intron
  ENST00000514747 FAM193B-003 177519788-177554507 protein_coding
  ENST00000515394 FAM193B-013 177536304-177538019 retained_intron
  ENST00000524677 FAM193B-004 177519792-177532533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000504130ENST00000505569ENST00000506432ENST00000506955ENST00000510163ENST00000510429ENST00000510479ENST00000514747ENST00000515394ENST00000524677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000504130 N/A N/A N/A 7.838±0.00 N/A N/A N/A N/A 7.419±0.00 N/A N/A N/A N/A N/A
ENST00000505569 N/A N/A N/A N/A N/A 0.997±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.286±0.00 N/A 30.805±0.00
ENST00000506955 1.462±0.00 2.634±0.00 N/A 0.624±0.35 1.250±0.00 1.256±0.00 N/A 1.951±0.00 0.479±0.18 N/A N/A 2.389±0.00 0.690±0.00 2.863±0.00
ENST00000510163 2.317±0.00 N/A N/A N/A N/A N/A N/A N/A 1.666±0.00 N/A N/A N/A 1.178±0.00 N/A
ENST00000510429 N/A N/A N/A N/A 4.193±0.00 N/A 0.800±0.00 N/A N/A 3.249±0.00 N/A 7.410±0.00 N/A N/A
ENST00000510479 1.636±0.00 N/A 0.199±0.00 N/A N/A 1.297±0.93 0.658±0.38 2.945±0.00 0.746±0.00 N/A 1.601±0.39 5.767±2.54 1.462±0.00 4.706±1.04
ENST00000514747 1.505±0.00 N/A N/A 1.894±0.00 2.072±0.00 N/A 0.496±0.00 4.610±0.00 1.529±0.00 7.784±0.00 N/A 4.719±1.28 2.102±0.43 5.687±0.40
ENST00000515394 N/A N/A N/A 4.370±0.00 N/A N/A N/A 2.248±0.00 N/A N/A 1.796±0.00 N/A N/A N/A
ENST00000524677 N/A 6.410±0.00 N/A 1.945±0.00 4.070±0.00 2.339±0.00 N/A N/A N/A N/A N/A 7.125±0.40 3.505±1.04 6.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0002YP CIL_0002YP_0001 CGP 5:177511577-177554541
CIL_0002YQ CIL_0002YQ_0001 CGP 5:177519788-177596124

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079512 fam193b family with sequence similarity 193, member B protein_coding Danio_rerio
ENSMUSG00000021495 Fam193b family with sequence similarity 193, member B protein_coding Mus_musculus

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