C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146833 TRIM4 9606 - 7:99876958-99919600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349062 TRIM4-001 99890413-99919600 protein_coding
  ENST00000354241 TRIM4-005 99901166-99919493 protein_coding
  ENST00000355947 TRIM4-004 99890413-99919531 protein_coding
  ENST00000447480 TRIM4-002 99876958-99919105 protein_coding
  ENST00000496896 TRIM4-003 99908246-99909598 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349062ENST00000354241ENST00000355947ENST00000447480
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349062 6.679±0.00 8.623±0.00 1.888±0.00 2.703±0.92 3.308±2.43 4.618±2.04 1.438±0.45 4.782±1.25 3.407±0.08 6.122±0.57 2.418±0.00 11.072±5.16 7.762±2.62 12.864±5.71
ENST00000354241 N/A N/A N/A 0.276±0.00 N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A N/A N/A
ENST00000355947 1.571±0.00 N/A N/A N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000447480 N/A N/A N/A N/A 3.363±0.00 N/A N/A N/A N/A N/A N/A 11.382±0.00 5.215±0.00 9.733±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding
GO:0070206 IDA protein trimerization

Homologs

No Homologs available.

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