C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein with MIF4G domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146909 NOM1 9606 + 7:156949723-156973182 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275820 NOM1-001 156949723-156973182 protein_coding
  ENST00000460332 NOM1-002 156954112-156960118 processed_transcript
  ENST00000469271 NOM1-003 156962171-156964125 retained_intron
  ENST00000472491 NOM1-006 156962168-156964235 retained_intron
  ENST00000475176 NOM1-004 156959996-156963352 retained_intron
  ENST00000485661 NOM1-007 156966159-156969196 retained_intron
  ENST00000486131 NOM1-008 156968755-156970083 retained_intron
  ENST00000489850 NOM1-005 156962171-156963475 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275820ENST00000475176ENST00000485661ENST00000486131
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275820 1.599±0.00 3.239±0.00 N/A 0.754±0.37 2.396±0.00 0.864±0.43 1.223±0.00 2.755±0.00 1.216±0.20 1.561±0.00 2.084±1.93 3.424±2.00 1.931±0.35 3.234±0.18
ENST00000475176 N/A N/A 1.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485661 N/A N/A N/A N/A N/A N/A 1.597±0.00 N/A N/A N/A 3.164±0.00 N/A N/A N/A
ENST00000486131 N/A N/A N/A N/A N/A N/A N/A 1.271±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025V CIL_00025V_0001 CGP 7:156668946-156973182
CIL_0007PG CIL_0007PG_0001 UCNEbase 7:156746986-157209208
CIL_00025W CIL_00025W_0001 CGP 7:156949723-157010651

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0008150 ND biological_process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060027 nom1 nucleolar protein with MIF4G domain 1 protein_coding Danio_rerio
ENSMUSG00000001569 Nom1 nucleolar protein with MIF4G domain 1 protein_coding Mus_musculus

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