C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family A, 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147381 MAGEA4 9606 + X:151912509-151925170 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276344 MAGEA4-201 151912889-151925170 protein_coding
  ENST00000360243 MAGEA4-010 151918227-151925170 protein_coding
  ENST00000370335 MAGEA4-009 151917552-151925170 protein_coding
  ENST00000370340 MAGEA4-008 151915508-151925170 protein_coding
  ENST00000393920 MAGEA4-202 151916925-151925170 protein_coding
  ENST00000393921 MAGEA4-203 151913505-151925170 protein_coding
  ENST00000416020 MAGEA4-004 151916195-151924355 protein_coding
  ENST00000425182 MAGEA4-006 151916195-151924315 protein_coding
  ENST00000430273 MAGEA4-003 151914152-151924388 protein_coding
  ENST00000431963 MAGEA4-011 151912509-151924179 protein_coding
  ENST00000431971 MAGEA4-002 151918902-151924388 protein_coding
  ENST00000441865 MAGEA4-005 151914830-151924388 protein_coding
  ENST00000448295 MAGEA4-001 151913463-151924315 protein_coding
  ENST00000457310 MAGEA4-007 151916874-151924388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeOvaryPlacentaTestisENST00000276344ENST00000393920ENST00000393921ENST00000441865ENST00000457310
Transcript ID Adipose Ovary Placenta Testis
ENST00000276344 N/A 0.007±0.00 0.833±0.00 5.722±0.00
ENST00000393920 N/A 0.013±0.00 13.991±0.00 19.880±10.46
ENST00000393921 N/A 0.003±0.00 N/A N/A
ENST00000441865 0.043±0.00 N/A N/A N/A
ENST00000457310 0.043±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000117 CIL_000117_0001 CGP X:151738451-151925170
CIL_000118 CIL_000118_0001 CGP X:151912509-151974680

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000031118 1700080O16Rik RIKEN cDNA 1700080O16 gene protein_coding Mus_musculus
ENSMUSG00000031179 3830417A13Rik RIKEN cDNA 3830417A13 gene protein_coding Mus_musculus
ENSMUSG00000033343 Magea4 melanoma antigen, family A, 4 protein_coding Mus_musculus
ENSMUSG00000043453 Magea10 melanoma antigen family A, 10 protein_coding Mus_musculus
ENSMUSG00000055746 Magea2 melanoma antigen, family A, 2 protein_coding Mus_musculus
ENSMUSG00000063728 Magea6 melanoma antigen, family A, 6 protein_coding Mus_musculus
ENSMUSG00000079349 Magea5 melanoma antigen, family A, 5 protein_coding Mus_musculus
ENSMUSG00000079350 Magea8 melanoma antigen, family A, 8 protein_coding Mus_musculus
ENSMUSG00000094196 Magea3 melanoma antigen, family A, 3 protein_coding Mus_musculus
ENSMUSG00000096644 Magea1 melanoma antigen, family A, 1 protein_coding Mus_musculus

Loading