C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bridging integrator 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147439 BIN3 9606 - 8:22620418-22669148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276416 BIN3-001 22620418-22669120 protein_coding
  ENST00000399977 BIN3-003 22620775-22644804 protein_coding
  ENST00000518366 BIN3-006 22636590-22669091 retained_intron
  ENST00000519335 BIN3-009 22621270-22669079 processed_transcript
  ENST00000519513 BIN3-002 22620712-22669113 protein_coding
  ENST00000519863 BIN3-012 22621531-22644804 processed_transcript
  ENST00000520292 BIN3-011 22625047-22669122 protein_coding
  ENST00000520489 BIN3-005 22620436-22626542 retained_intron
  ENST00000521140 BIN3-010 22629704-22644804 retained_intron
  ENST00000522268 BIN3-007 22644588-22669148 protein_coding
  ENST00000522687 BIN3-008 22624230-22669125 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungENST00000276416ENST00000519513
Transcript ID Liver Lung
ENST00000276416 N/A 1.858±0.00
ENST00000519513 4.748±0.00 11.527±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 NAS cytokinesis
GO:0000917 IEA barrier septum assembly
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005884 IEA actin filament
GO:0007015 NAS actin filament organization
GO:0008093 NAS cytoskeletal adaptor activity
GO:0008104 IMP protein localization
GO:0009826 IMP unidimensional cell growth
GO:0010591 IEA regulation of lamellipodium assembly
GO:0014839 IEA myoblast migration involved in skeletal muscle regeneration
GO:0043403 IEA skeletal muscle tissue regeneration
GO:0048741 IEA skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077521 bin3 bridging integrator 3 protein_coding Danio_rerio
ENSDARG00000088388 BIN3 (2 of 2) bridging integrator 3 protein_coding Danio_rerio
ENSMUSG00000022089 Bin3 bridging integrator 3 protein_coding Mus_musculus

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