C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: charged multivesicular body protein 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147457 CHMP7 9606 + 8:23243637-23262000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313219 CHMP7-201 23246091-23261999 protein_coding
  ENST00000397677 CHMP7-001 23243637-23261992 protein_coding
  ENST00000517325 CHMP7-002 23246642-23261992 nonsense_mediated_decay
  ENST00000519414 CHMP7-006 23246637-23256563 nonsense_mediated_decay
  ENST00000519503 CHMP7-003 23246666-23258830 nonsense_mediated_decay
  ENST00000519529 CHMP7-007 23246659-23258491 retained_intron
  ENST00000519984 CHMP7-005 23246659-23255365 protein_coding
  ENST00000520102 CHMP7-008 23256603-23260286 processed_transcript
  ENST00000521656 CHMP7-009 23259893-23260587 retained_intron
  ENST00000523091 CHMP7-004 23254806-23262000 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313219ENST00000397677ENST00000517325ENST00000519414ENST00000519503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313219 N/A N/A N/A 0.967±0.00 N/A N/A 0.298±0.00 N/A N/A N/A N/A 2.375±0.00 N/A N/A
ENST00000397677 N/A 5.302±0.00 N/A N/A N/A 1.221±0.00 N/A N/A N/A 1.112±0.00 N/A 3.271±2.03 N/A N/A
ENST00000517325 8.347±0.00 12.472±0.00 3.737±0.00 7.185±2.56 9.056±4.87 7.285±3.34 7.474±5.57 6.140±2.83 4.537±0.34 7.752±3.72 6.669±4.69 7.961±3.64 8.675±2.69 13.503±0.55
ENST00000519414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.032±0.00 N/A N/A N/A
ENST00000519503 N/A N/A N/A 3.429±0.00 3.866±0.00 N/A 2.559±0.00 2.036±0.00 3.099±0.00 2.758±0.00 4.869±0.00 4.744±0.00 5.074±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FQ CIL_0008FQ_0001 VISTA 8:23193785-23795287
CIL_0007YD CIL_0007YD_0001 VISTA 8:23207989-23809472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000815 IDA ESCRT III complex
GO:0005829 TAS cytosol
GO:0007034 IEA vacuolar transport
GO:0008565 IMP protein transporter activity
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0045324 IMP late endosome to vacuole transport
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041362 chmp7 CHMP family, member 7 protein_coding Danio_rerio
ENSMUSG00000034190 Chmp7 charged multivesicular body protein 7 protein_coding Mus_musculus

Loading