C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline synthetase co-transcribed homolog (bacterial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147471 PROSC 9606 + 8:37762593-37779767 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328195 PROSC-001 37762593-37779767 protein_coding
  ENST00000518036 PROSC-006 37762610-37772866 nonsense_mediated_decay
  ENST00000520073 PROSC-004 37762595-37766741 retained_intron
  ENST00000521631 PROSC-009 37772753-37775473 retained_intron
  ENST00000522808 PROSC-010 37774936-37778080 retained_intron
  ENST00000523187 PROSC-003 37762600-37775451 protein_coding
  ENST00000523358 PROSC-008 37762600-37772891 protein_coding
  ENST00000523521 PROSC-012 37766280-37775481 protein_coding
  ENST00000523994 PROSC-005 37762655-37766716 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328195ENST00000521631ENST00000523358ENST00000523521
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328195 14.895±0.00 11.820±0.00 3.318±0.00 8.651±1.89 12.034±6.31 14.880±7.48 8.550±6.16 17.933±5.29 11.366±7.12 10.876±2.69 10.580±7.08 14.231±6.39 9.275±2.47 6.015±4.21
ENST00000521631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.982±0.00 18.015±0.00 5.262±0.00
ENST00000523358 N/A N/A 3.053±0.00 10.856±0.00 N/A N/A 4.432±0.00 N/A 9.083±0.00 N/A 6.798±0.00 10.126±0.00 N/A N/A
ENST00000523521 N/A N/A 7.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0001 VISTA 8:37337791-37938686
CIL_0009C5 CIL_0009C5_0001 VISTA 8:37525567-38127835
CIL_0007QT CIL_0007QT_0001 VISTA 8:37525572-38127829
CIL_0002IV CIL_0002IV_0001 CGP 8:37736599-37779767
CIL_0002IW CIL_0002IW_0001 CGP 8:37762593-37844896

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IDA intracellular
GO:0005737 NAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0030170 IBA pyridoxal phosphate binding
GO:0070062 IDA extracellular vesicular exosome
GO:1901605 IBA alpha-amino acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060288 prosc proline synthetase co-transcribed homolog (bacterial) protein_coding Danio_rerio
ENSMUSG00000031485 Prosc proline synthetase co-transcribed protein_coding Mus_musculus

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