C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GINS complex subunit 4 (Sld5 homolog)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147536 GINS4 9606 + 8:41529206-41545046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276533 GINS4-201 41529206-41545046 protein_coding
  ENST00000518430 GINS4-008 41541804-41542409 retained_intron
  ENST00000518671 GINS4-003 41529237-41542402 protein_coding
  ENST00000520354 GINS4-002 41529218-41542239 nonsense_mediated_decay
  ENST00000520631 GINS4-007 41529227-41537301 retained_intron
  ENST00000520710 GINS4-001 41529221-41538036 protein_coding
  ENST00000520736 GINS4-006 41529230-41536452 retained_intron
  ENST00000522642 GINS4-005 41536358-41540004 retained_intron
  ENST00000523277 GINS4-004 41529249-41545030 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000276533ENST00000518430ENST00000518671ENST00000520354ENST00000520710ENST00000520736ENST00000522642ENST00000523277
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000276533 0.270±0.00 0.428±0.00 N/A 0.133±0.00 0.257±0.07 0.187±0.17 0.093±0.09 0.221±0.00 0.052±0.00 0.050±0.00 0.011±0.00 1.076±1.16 1.607±1.23 1.199±0.50
ENST00000518430 N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.898±0.00
ENST00000518671 N/A N/A N/A 0.035±0.00 N/A 0.248±0.00 N/A N/A N/A N/A N/A 3.163±0.00 N/A N/A
ENST00000520354 N/A N/A N/A N/A 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520710 N/A 0.682±0.00 N/A N/A N/A 0.051±0.00 N/A 0.196±0.00 0.108±0.00 0.137±0.00 0.038±0.00 N/A N/A N/A
ENST00000520736 N/A N/A N/A N/A 1.336±0.00 N/A N/A N/A 0.235±0.00 1.723±0.00 N/A 9.081±6.33 21.315±0.00 11.282±0.00
ENST00000522642 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.212±0.00 N/A N/A N/A N/A
ENST00000523277 N/A 0.656±0.00 N/A 0.140±0.10 0.171±0.00 0.020±0.00 0.003±0.00 N/A 0.047±0.00 0.051±0.00 0.074±0.06 0.297±0.00 0.577±0.24 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0001833 IEA inner cell mass cell proliferation
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016044 gins4 GINS complex subunit 4 (Sld5 homolog) protein_coding Danio_rerio
ENSMUSG00000031546 Gins4 GINS complex subunit 4 (Sld5 homolog) protein_coding Mus_musculus

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