C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: low density lipoprotein receptor-related protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147650 LRP12 9606 - 8:104489231-104589024 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276654 LRP12-001 104489250-104589006 protein_coding
  ENST00000424843 LRP12-002 104489231-104589024 protein_coding
  ENST00000518375 LRP12-006 104489256-104496142 processed_transcript
  ENST00000519675 LRP12-003 104504244-104588995 retained_intron
  ENST00000520770 LRP12-007 104497754-104589009 processed_transcript
  ENST00000522046 LRP12-005 104491421-104495750 processed_transcript
  ENST00000523007 LRP12-004 104491418-104497605 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000276654ENST00000424843ENST00000518375ENST00000519675ENST00000520770ENST00000523007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000276654 1.779±0.00 0.815±0.00 0.561±0.00 2.507±0.89 1.412±0.00 0.561±0.00 2.939±1.39 1.443±0.00 0.832±0.80 1.144±0.25 1.375±0.00 1.049±0.58 0.595±0.00 2.209±0.43
ENST00000424843 N/A 0.683±0.00 0.398±0.00 3.511±0.39 1.156±0.49 1.373±0.43 1.172±0.00 0.849±0.00 0.657±0.50 1.249±0.27 0.772±0.47 1.020±0.52 1.016±0.46 0.686±0.00
ENST00000518375 N/A 0.262±0.00 N/A N/A 0.767±0.00 N/A N/A N/A 0.032±0.00 0.393±0.00 0.433±0.00 0.522±0.00 0.285±0.00 0.732±0.00
ENST00000519675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00
ENST00000520770 N/A N/A N/A N/A N/A N/A N/A 0.552±0.00 N/A N/A 1.912±0.00 N/A N/A N/A
ENST00000523007 N/A N/A N/A N/A 1.748±0.00 N/A N/A 0.572±0.00 N/A N/A 0.718±0.00 0.989±0.53 N/A 2.604±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005041 NAS low-density lipoprotein receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005887 IDA integral component of plasma membrane
GO:0005905 IEA coated pit
GO:0006897 NAS endocytosis
GO:0006898 NAS receptor-mediated endocytosis
GO:0007165 NAS signal transduction
GO:0016021 NAS integral component of membrane
GO:0040008 NAS regulation of growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059674 lrp12 low density lipoprotein receptor-related protein 12 protein_coding Danio_rerio
ENSMUSG00000022305 Lrp12 low density lipoprotein-related protein 12 protein_coding Mus_musculus

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