C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147905 ZCCHC7 9606 + 9:37120539-37358149 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322831 ZCCHC7-001 37120605-37187054 protein_coding
  ENST00000336755 ZCCHC7-003 37120539-37358149 protein_coding
  ENST00000461038 ZCCHC7-004 37120636-37358149 processed_transcript
  ENST00000463625 ZCCHC7-006 37284163-37354802 processed_transcript
  ENST00000481507 ZCCHC7-008 37326924-37357390 processed_transcript
  ENST00000488607 ZCCHC7-002 37144932-37356980 processed_transcript
  ENST00000496099 ZCCHC7-009 37327320-37357165 processed_transcript
  ENST00000497924 ZCCHC7-007 37326034-37357159 processed_transcript
  ENST00000534928 ZCCHC7-201 37120598-37358146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322831ENST00000336755ENST00000461038ENST00000463625ENST00000497924ENST00000534928
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322831 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.972±0.00 N/A 1.710±0.00 N/A
ENST00000336755 2.510±0.00 2.940±0.00 1.277±0.19 2.932±0.72 2.440±1.20 1.666±0.00 2.532±0.00 1.521±0.57 2.187±1.51 0.796±0.00 3.953±1.26 3.009±0.89 7.113±0.80
ENST00000461038 N/A 1.829±0.00 1.094±0.00 1.093±0.00 1.493±0.00 N/A 1.062±0.00 0.375±0.00 2.672±0.00 1.080±0.00 1.135±0.00 N/A 1.367±0.00
ENST00000463625 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.643±0.00 N/A N/A N/A
ENST00000497924 N/A N/A N/A N/A 1.714±0.00 N/A N/A N/A N/A 1.416±0.00 4.556±0.00 N/A N/A
ENST00000534928 1.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K7 CIL_0006K7_0001 CGP 9:36833275-37358149
CIL_000843 CIL_000843_0001 VISTA 9:36915019-37515778
CIL_0008YP CIL_0008YP_0001 VISTA 9:36951210-37552226
CIL_0007LK CIL_0007LK_0001 UCNEbase 9:36978917-37340407
CIL_00080S CIL_00080S_0001 VISTA 9:37036633-37638309
CIL_00035L CIL_00035L_0001 CGP 9:37120539-37436990

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055443 zcchc7 zinc finger, CCHC domain containing 7 protein_coding Danio_rerio
ENSMUSG00000035649 Zcchc7 zinc finger, CCHC domain containing 7 protein_coding Mus_musculus

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