C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COBW domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147996 CBWD5 9606 + 9:65668805-65734041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377380 CBWD5-013 65675875-65682026 retained_intron
  ENST00000377384 CBWD5-012 65675875-65682577 protein_coding
  ENST00000377389 CBWD5-011 65675837-65733673 nonsense_mediated_decay
  ENST00000377392 CBWD5-201 65675834-65734040 protein_coding
  ENST00000377395 CBWD5-026 65675938-65733676 protein_coding
  ENST00000382404 CBWD5-003 65675987-65701415 retained_intron
  ENST00000382405 CBWD5-001 65675799-65734041 protein_coding
  ENST00000429800 CBWD5-023 65675928-65733673 protein_coding
  ENST00000430059 CBWD5-008 65675924-65733674 protein_coding
  ENST00000441808 CBWD5-004 65668805-65681662 processed_transcript
  ENST00000461932 CBWD5-009 65719385-65733994 retained_intron
  ENST00000463075 CBWD5-016 65731336-65733672 retained_intron
  ENST00000464913 CBWD5-031 65675941-65679212 processed_transcript
  ENST00000465474 CBWD5-024 65675930-65732241 nonsense_mediated_decay
  ENST00000468066 CBWD5-007 65708906-65733580 processed_transcript
  ENST00000468198 CBWD5-028 65690967-65704923 retained_intron
  ENST00000469921 CBWD5-018 65675858-65703471 nonsense_mediated_decay
  ENST00000471620 CBWD5-034 65693393-65703303 retained_intron
  ENST00000472916 CBWD5-032 65681615-65703014 processed_transcript
  ENST00000476161 CBWD5-019 65675894-65732393 nonsense_mediated_decay
  ENST00000476797 CBWD5-027 65688401-65733673 processed_transcript
  ENST00000478650 CBWD5-005 65681574-65683342 retained_intron
  ENST00000480229 CBWD5-022 65675906-65733859 nonsense_mediated_decay
  ENST00000480819 CBWD5-017 65719955-65733671 retained_intron
  ENST00000485088 CBWD5-029 65706433-65733992 retained_intron
  ENST00000486191 CBWD5-035 65723084-65733647 processed_transcript
  ENST00000486221 CBWD5-025 65675930-65733672 nonsense_mediated_decay
  ENST00000486466 CBWD5-030 65675925-65679544 retained_intron
  ENST00000489273 CBWD5-037 65700287-65733671 protein_coding
  ENST00000491485 CBWD5-038 65732693-65733674 retained_intron
  ENST00000495615 CBWD5-036 65693386-65701108 retained_intron
  ENST00000496364 CBWD5-033 65690967-65708958 processed_transcript
  ENST00000497250 CBWD5-020 65675896-65733670 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377380ENST00000377384ENST00000377392ENST00000377395ENST00000382404ENST00000429800ENST00000430059ENST00000461932ENST00000463075ENST00000464913ENST00000468066ENST00000468198ENST00000469921ENST00000478650ENST00000480229ENST00000480819ENST00000485088ENST00000486191ENST00000486466ENST00000489273ENST00000491485ENST00000495615ENST00000497250
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377380 N/A N/A N/A N/A N/A N/A 0.356±0.00 4.185±0.00 1.603±0.00 3.364±0.00 N/A N/A 0.473±0.00 0.980±0.00
ENST00000377384 N/A N/A 0.924±0.00 1.353±0.00 2.679±0.00 1.695±0.00 0.169±0.08 N/A 0.239±0.00 N/A N/A N/A N/A N/A
ENST00000377392 N/A N/A N/A 0.352±0.00 N/A N/A N/A N/A N/A N/A N/A 0.324±0.00 N/A 0.095±0.00
ENST00000377395 N/A N/A N/A N/A N/A 0.161±0.00 0.151±0.00 2.004±0.00 N/A N/A N/A N/A N/A N/A
ENST00000382404 N/A N/A N/A 0.943±0.00 N/A 0.835±0.00 N/A 1.655±0.00 N/A N/A N/A 0.408±0.33 N/A N/A
ENST00000429800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.156±0.00 N/A
ENST00000430059 0.471±0.00 N/A N/A N/A N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A
ENST00000461932 N/A N/A N/A N/A N/A 0.403±0.00 0.031±0.00 N/A N/A N/A N/A 0.368±0.00 0.064±0.00 N/A
ENST00000463075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00
ENST00000464913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 N/A N/A N/A
ENST00000468066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A
ENST00000468198 0.132±0.00 0.625±0.00 0.768±0.00 0.607±0.19 1.059±0.83 0.520±0.46 0.216±0.14 0.823±0.00 1.044±0.00 1.192±0.00 0.157±0.00 0.550±0.32 0.078±0.00 0.566±0.00
ENST00000469921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.05 N/A
ENST00000478650 N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A N/A 3.382±0.00 N/A N/A
ENST00000480229 N/A 0.820±0.00 N/A N/A 0.468±0.00 N/A N/A N/A 0.266±0.00 N/A 0.062±0.00 N/A N/A N/A
ENST00000480819 N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A 1.329±0.00
ENST00000485088 0.083±0.00 0.362±0.00 N/A 0.395±0.18 0.684±0.50 0.234±0.18 0.113±0.06 0.275±0.00 0.324±0.23 0.696±0.00 0.025±0.00 0.520±0.35 0.091±0.03 0.481±0.00
ENST00000486191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A
ENST00000486466 N/A N/A 2.802±0.00 N/A N/A N/A 0.795±0.00 N/A 2.503±0.00 1.823±0.00 N/A 3.928±0.00 N/A N/A
ENST00000489273 N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A 0.294±0.00 0.536±0.00 N/A N/A
ENST00000491485 0.400±0.00 N/A N/A N/A 0.677±0.00 N/A N/A 1.816±0.00 N/A N/A N/A N/A 0.385±0.00 0.318±0.00
ENST00000495615 N/A N/A 1.685±0.00 N/A N/A N/A N/A N/A N/A 2.739±0.00 0.473±0.00 N/A N/A N/A
ENST00000497250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VT CIL_0000VT_0002 CGP 9:65282101-65734041
CIL_00038H CIL_00038H_0003 CGP 9:65668805-65738784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004318 cbwd COBW domain containing protein_coding Danio_rerio
ENSMUSG00000024878 Cbwd1 COBW domain containing 1 protein_coding Mus_musculus

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