C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: surfeit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148248 SURF4 9606 - 9:133361449-133376166 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371982 SURF4-003 133364969-133376010 processed_transcript
  ENST00000371989 SURF4-001 133361449-133376099 protein_coding
  ENST00000371991 SURF4-004 133363795-133376043 protein_coding
  ENST00000465565 SURF4-006 133363453-133366077 processed_transcript
  ENST00000467910 SURF4-005 133363555-133375991 processed_transcript
  ENST00000485435 SURF4-002 133362868-133376099 protein_coding
  ENST00000545297 SURF4-201 133361450-133376166 protein_coding
  ENST00000613129 SURF4-202 133361450-133376166 protein_coding
  ENST00000618229 SURF4-203 133361450-133376166 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371989ENST00000485435ENST00000545297ENST00000618229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371989 86.128±0.00 43.247±0.00 8.090±0.00 17.304±6.22 62.046±49.60 31.204±14.34 15.922±11.39 54.578±22.83 79.846±65.51 38.679±27.02 21.253±12.28 60.350±25.86 103.973±11.02 42.927±14.25
ENST00000485435 N/A N/A N/A 11.825±0.00 N/A N/A N/A N/A N/A N/A N/A 47.853±0.00 50.249±0.00 30.371±1.47
ENST00000545297 N/A 6.584±0.00 N/A N/A N/A N/A 1.082±0.00 N/A N/A N/A N/A 7.043±0.00 27.193±0.00 18.128±0.00
ENST00000618229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DE CIL_0006DE_0001 CGP 9:133356552-133376166
CIL_0006DD CIL_0006DD_0001 CGP 9:133361449-133406096

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0007030 IMP Golgi organization
GO:0010638 IMP positive regulation of organelle organization
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002702 surf4 surfeit gene 4 protein_coding Danio_rerio
ENSDARG00000035131 surf4l surfeit gene 4, like protein_coding Danio_rerio
ENSMUSG00000014867 Surf4 surfeit gene 4 protein_coding Mus_musculus

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