C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: surfeit 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148296 SURF6 9606 - 9:133330716-133336398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372022 SURF6-001 133330716-133336398 protein_coding
  ENST00000468290 SURF6-002 133331806-133332939 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372022ENST00000468290
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372022 7.128±0.00 10.355±0.00 1.495±0.00 6.403±4.29 4.549±3.14 6.608±4.35 2.360±1.71 6.164±4.44 3.675±1.62 4.675±3.20 6.991±5.59 14.697±7.30 12.010±1.24 10.377±0.95
ENST00000468290 4.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IX CIL_0006IX_0001 CGP 9:133250401-133336398
CIL_0006DI CIL_0006DI_0001 CGP 9:133330716-133348131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001652 ISS granular component
GO:0003677 ISS DNA binding
GO:0003723 ISS RNA binding
GO:0005654 IEA nucleoplasm
GO:0005730 TAS nucleolus
GO:0042254 IEA ribosome biogenesis
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035427 surf6 surfeit 6 protein_coding Danio_rerio
ENSMUSG00000036160 Surf6 surfeit gene 6 protein_coding Mus_musculus

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