C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hydroxysteroid (17-beta) dehydrogenase 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149084 HSD17B12 9606 + 11:43556436-43856617 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278353 HSD17B12-001 43680709-43856610 protein_coding
  ENST00000395700 HSD17B12-002 43680781-43755536 protein_coding
  ENST00000525736 HSD17B12-003 43852047-43856617 retained_intron
  ENST00000526615 HSD17B12-008 43556436-43673262 processed_transcript
  ENST00000527213 HSD17B12-014 43724039-43840033 processed_transcript
  ENST00000527433 HSD17B12-012 43680680-43754121 processed_transcript
  ENST00000529261 HSD17B12-007 43644266-43831005 processed_transcript
  ENST00000531185 HSD17B12-015 43680709-43838395 protein_coding
  ENST00000532178 HSD17B12-013 43754044-43806461 processed_transcript
  ENST00000532864 HSD17B12-009 43578889-43838398 processed_transcript
  ENST00000532989 HSD17B12-011 43670286-43673282 processed_transcript
  ENST00000533090 HSD17B12-004 43830063-43855898 retained_intron
  ENST00000533358 HSD17B12-010 43579495-43673243 processed_transcript
  ENST00000533802 HSD17B12-005 43834074-43855305 processed_transcript
  ENST00000534053 HSD17B12-006 43837949-43854781 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278353ENST00000525736ENST00000527213ENST00000533802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278353 19.261±0.00 16.747±0.00 6.695±0.00 15.901±11.25 21.071±6.11 16.634±6.20 9.900±4.13 17.755±5.45 14.861±8.01 14.474±10.34 3.953±3.08 13.488±4.94 12.396±2.97 17.792±1.03
ENST00000525736 N/A N/A 0.637±0.00 N/A N/A N/A N/A N/A 1.239±0.00 N/A N/A N/A N/A N/A
ENST00000527213 N/A N/A N/A N/A N/A N/A N/A 11.239±0.00 N/A N/A N/A N/A N/A N/A
ENST00000533802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.704±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UX CIL_0002UX_0002 CGP 11:43556436-43920266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001968 IEA fibronectin binding
GO:0004303 IEA estradiol 17-beta-dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005518 IEA collagen binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006633 IEA fatty acid biosynthetic process
GO:0006703 IEA estrogen biosynthetic process
GO:0008152 IEA metabolic process
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0019432 TAS triglyceride biosynthetic process
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015709 hsd17b12a hydroxysteroid (17-beta) dehydrogenase 12a protein_coding Danio_rerio
ENSDARG00000035872 hsd17b12b hydroxysteroid (17-beta) dehydrogenase 12b protein_coding Danio_rerio
ENSMUSG00000027195 Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 protein_coding Mus_musculus

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