C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peptidase domain containing associated with muscle regeneration 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149090 PAMR1 9606 - 11:35431823-35530300 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000527605 PAMR1-005 35432425-35525735 protein_coding
  ENST00000529303 PAMR1-007 35441648-35525603 protein_coding
  ENST00000531219 PAMR1-006 35434568-35436225 retained_intron
  ENST00000534803 PAMR1-004 35451888-35525597 processed_transcript
  ENST00000611014 PAMR1-201 35431833-35494274 protein_coding
  ENST00000615849 PAMR1-202 35431831-35526031 protein_coding
  ENST00000619888 PAMR1-001 35431823-35526031 protein_coding
  ENST00000621476 PAMR1-003 35432113-35530300 protein_coding
  ENST00000622144 PAMR1-002 35431823-35525623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000527605ENST00000529303ENST00000531219ENST00000534803ENST00000611014ENST00000615849ENST00000619888ENST00000621476ENST00000622144
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000527605 N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.635±0.00 N/A N/A N/A
ENST00000529303 N/A N/A 2.063±0.00 2.655±0.00 N/A N/A N/A N/A 12.728±0.00 N/A N/A N/A N/A N/A
ENST00000531219 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.745±0.00 N/A N/A N/A N/A
ENST00000534803 N/A 0.316±0.00 N/A 1.482±0.00 1.584±0.00 3.210±0.00 0.591±0.00 N/A 7.660±0.00 0.795±0.00 N/A N/A N/A N/A
ENST00000611014 3.953±0.00 0.163±0.00 N/A 6.850±0.00 3.277±0.00 12.590±0.00 3.496±0.00 1.391±0.52 0.339±0.00 2.553±0.00 1.291±0.00 2.110±1.29 23.861±6.50 1.243±0.00
ENST00000615849 N/A N/A N/A N/A N/A 2.098±1.37 1.069±0.00 N/A N/A N/A 0.321±0.00 N/A N/A 0.591±0.43
ENST00000619888 N/A N/A N/A 1.828±0.00 1.382±0.00 N/A 0.479±0.00 N/A 4.006±0.00 N/A N/A 0.847±0.17 6.068±0.00 N/A
ENST00000621476 N/A N/A 0.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622144 1.912±0.00 N/A N/A 7.024±0.00 1.656±0.81 3.215±1.86 0.923±0.00 0.714±0.45 1.570±0.00 0.377±0.27 N/A 0.455±0.00 13.942±0.67 2.812±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093480 PAMR1 peptidase domain containing associated with muscle regeneration 1 protein_coding Danio_rerio
ENSMUSG00000027188 Pamr1 peptidase domain containing associated with muscle regeneration 1 protein_coding Mus_musculus

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