C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor GTPase activating protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149182 ARFGAP2 9606 - 11:47164299-47177125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000395449 ARFGAP2-006 47165215-47176859 processed_transcript
  ENST00000426335 ARFGAP2-201 47164299-47177125 protein_coding
  ENST00000524586 ARFGAP2-020 47175061-47176867 nonsense_mediated_decay
  ENST00000524727 ARFGAP2-005 47173098-47176859 retained_intron
  ENST00000524782 ARFGAP2-001 47164301-47177082 protein_coding
  ENST00000525314 ARFGAP2-015 47171759-47176882 protein_coding
  ENST00000525398 ARFGAP2-023 47171426-47176870 protein_coding
  ENST00000525635 ARFGAP2-029 47167974-47168503 retained_intron
  ENST00000526185 ARFGAP2-003 47174407-47176868 retained_intron
  ENST00000526342 ARFGAP2-026 47166585-47176859 protein_coding
  ENST00000526948 ARFGAP2-025 47171525-47172186 retained_intron
  ENST00000527097 ARFGAP2-022 47172026-47176868 retained_intron
  ENST00000527776 ARFGAP2-027 47166268-47171557 protein_coding
  ENST00000527927 ARFGAP2-017 47166861-47176880 protein_coding
  ENST00000528041 ARFGAP2-012 47173462-47176879 nonsense_mediated_decay
  ENST00000528072 ARFGAP2-008 47176214-47176879 retained_intron
  ENST00000528444 ARFGAP2-002 47172312-47176867 protein_coding
  ENST00000528708 ARFGAP2-010 47175026-47176787 nonsense_mediated_decay
  ENST00000529439 ARFGAP2-009 47173759-47176784 nonsense_mediated_decay
  ENST00000529455 ARFGAP2-019 47168128-47176851 nonsense_mediated_decay
  ENST00000529599 ARFGAP2-013 47173434-47176879 processed_transcript
  ENST00000530596 ARFGAP2-021 47173781-47176868 protein_coding
  ENST00000530794 ARFGAP2-011 47175154-47176880 retained_intron
  ENST00000531750 ARFGAP2-018 47171712-47176880 processed_transcript
  ENST00000532438 ARFGAP2-014 47168124-47176879 nonsense_mediated_decay
  ENST00000532478 ARFGAP2-016 47167909-47176846 nonsense_mediated_decay
  ENST00000533243 ARFGAP2-007 47165281-47177125 nonsense_mediated_decay
  ENST00000533939 ARFGAP2-024 47173856-47176847 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395449ENST00000426335ENST00000524782ENST00000527776ENST00000532438ENST00000533243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395449 N/A N/A N/A N/A N/A 6.487±0.00 N/A N/A N/A N/A N/A 8.838±0.00 25.533±0.00 N/A
ENST00000426335 4.813±0.00 12.190±0.00 N/A N/A 9.389±0.00 9.356±0.00 N/A 15.022±0.00 6.455±1.11 5.791±0.00 N/A 8.351±0.47 N/A 7.623±0.00
ENST00000524782 14.730±0.00 21.762±0.00 3.861±0.00 18.043±8.75 16.111±5.57 14.529±0.00 11.112±8.70 12.273±9.71 7.252±0.00 4.342±0.00 5.938±0.00 19.165±11.15 25.594±3.33 21.783±7.66
ENST00000527776 N/A N/A N/A N/A N/A N/A 9.300±0.00 14.277±0.00 N/A N/A 14.981±0.00 N/A N/A N/A
ENST00000532438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.615±0.00 N/A N/A N/A
ENST00000533243 N/A N/A N/A 17.821±8.18 N/A N/A N/A N/A 6.545±0.00 N/A 4.589±0.00 10.405±0.00 N/A 42.822±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067601 arfgap2 ADP-ribosylation factor GTPase activating protein 2 protein_coding Danio_rerio
ENSMUSG00000027255 Arfgap2 ADP-ribosylation factor GTPase activating protein 2 protein_coding Mus_musculus

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