C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: echinoderm microtubule associated protein like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149499 EML3 9606 - 11:62602218-62612765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278845 EML3-003 62602219-62612524 protein_coding
  ENST00000394773 EML3-001 62602218-62612765 protein_coding
  ENST00000394776 EML3-002 62602219-62611596 protein_coding
  ENST00000419857 EML3-006 62611112-62612746 protein_coding
  ENST00000438258 EML3-009 62605910-62607993 processed_transcript
  ENST00000439994 EML3-013 62602218-62603738 protein_coding
  ENST00000460939 EML3-011 62602220-62606212 retained_intron
  ENST00000462626 EML3-012 62605837-62607042 retained_intron
  ENST00000466671 EML3-005 62610977-62612280 protein_coding
  ENST00000466886 EML3-004 62610976-62612376 protein_coding
  ENST00000483199 EML3-010 62604073-62607392 retained_intron
  ENST00000494176 EML3-016 62602220-62611680 protein_coding
  ENST00000494448 EML3-007 62602226-62612381 nonsense_mediated_decay
  ENST00000524518 EML3-018 62604708-62605682 retained_intron
  ENST00000526116 EML3-017 62605596-62607082 retained_intron
  ENST00000529309 EML3-014 62602220-62612530 protein_coding
  ENST00000531557 EML3-015 62602220-62611007 protein_coding
  ENST00000533165 EML3-019 62603116-62605229 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000278845ENST00000394773ENST00000394776ENST00000438258ENST00000439994ENST00000460939ENST00000494448ENST00000526116ENST00000529309ENST00000531557ENST00000533165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000278845 14.056±0.00 12.834±0.00 N/A 6.012±0.00 10.245±0.00 N/A 2.113±0.00 6.295±0.00 N/A 3.372±0.00 21.917±13.39 4.717±0.69 6.596±2.01
ENST00000394773 N/A N/A N/A N/A 4.916±0.00 4.956±0.00 1.670±0.00 3.984±0.00 4.725±0.00 N/A 5.098±0.00 5.050±0.00 N/A
ENST00000394776 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.515±0.00 N/A 6.284±0.00 2.882±0.00
ENST00000438258 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A N/A N/A
ENST00000439994 N/A N/A N/A N/A N/A N/A N/A N/A 4.441±0.00 N/A N/A N/A N/A
ENST00000460939 N/A 17.470±0.00 N/A N/A 11.852±0.00 N/A N/A N/A N/A 6.960±0.00 9.038±2.75 N/A N/A
ENST00000494448 N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526116 N/A N/A N/A N/A N/A N/A 0.300±0.00 3.920±0.00 N/A N/A N/A N/A N/A
ENST00000529309 N/A N/A 1.005±0.00 0.416±0.00 1.026±0.00 N/A N/A N/A N/A N/A 2.917±2.30 N/A N/A
ENST00000531557 9.665±0.00 9.860±0.00 N/A 0.479±0.00 4.169±3.49 11.481±0.00 1.801±0.00 4.167±3.09 2.417±1.66 2.023±1.38 15.516±9.29 7.137±2.81 10.966±0.00
ENST00000533165 N/A N/A N/A N/A N/A N/A 0.502±0.00 N/A N/A N/A 15.239±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058038 eml3 echinoderm microtubule associated protein like 3 protein_coding Danio_rerio
ENSMUSG00000071647 Eml3 echinoderm microtubule associated protein like 3 protein_coding Mus_musculus

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