C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beta-1,3-glucuronyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149541 B3GAT3 9606 - 11:62615296-62622175 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265471 B3GAT3-001 62615296-62622175 protein_coding
  ENST00000531383 B3GAT3-002 62615297-62622154 protein_coding
  ENST00000532585 B3GAT3-003 62615451-62621984 nonsense_mediated_decay
  ENST00000533303 B3GAT3-006 62616689-62617454 retained_intron
  ENST00000534026 B3GAT3-004 62616067-62621984 protein_coding
  ENST00000534715 B3GAT3-005 62617005-62622146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265471ENST00000531383ENST00000532585ENST00000533303ENST00000534715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265471 8.320±0.00 14.953±0.00 N/A 9.109±6.87 7.008±0.00 10.983±0.00 1.265±1.11 7.136±6.91 9.681±0.00 15.041±0.00 4.550±0.00 17.301±11.04 29.805±9.46 12.052±5.86
ENST00000531383 N/A N/A 0.345±0.00 N/A 1.143±0.00 1.317±0.00 0.069±0.00 N/A 1.924±0.00 N/A N/A 0.169±0.00 N/A N/A
ENST00000532585 N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A 1.192±0.00 N/A N/A 0.136±0.00 N/A N/A
ENST00000533303 N/A N/A N/A N/A 1.037±0.00 N/A 0.159±0.00 N/A 0.801±0.00 N/A N/A 1.206±0.00 N/A N/A
ENST00000534715 N/A N/A N/A N/A N/A N/A N/A 0.617±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005794 IDA Golgi apparatus
GO:0005801 IDA cis-Golgi network
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 NAS glycosaminoglycan biosynthetic process
GO:0006486 IEA protein glycosylation
GO:0008152 IEA metabolic process
GO:0015012 IDA heparan sulfate proteoglycan biosynthetic process
GO:0015018 NAS:IEA galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0015020 IMP glucuronosyltransferase activity
GO:0016020 IDA:IEA membrane
GO:0016021 NAS integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0050650 IDA chondroitin sulfate proteoglycan biosynthetic process
GO:0050651 IDA dermatan sulfate proteoglycan biosynthetic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001939 b3gat3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein_coding Danio_rerio
ENSMUSG00000071649 B3gat3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) protein_coding Mus_musculus

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